| Entry |
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| Gene name |
LIG1
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| Definition |
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| KO |
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| Organism |
pbi Python bivittatus (Burmese python)
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| Pathway |
| DNA replication | | Base excision repair | | Nucleotide excision repair | | Mismatch repair |
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| Brite |
KEGG Orthology (KO) [BR:pbi00001]
Genetic Information Processing
Replication and repair
03030 DNA replication
103064233 (LIG1)
03410 Base excision repair
103064233 (LIG1)
03420 Nucleotide excision repair
103064233 (LIG1)
03430 Mismatch repair
103064233 (LIG1)
Enzymes [BR:pbi01000]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103064233 (LIG1)
6.5.1.6 DNA ligase (ATP or NAD+)
103064233 (LIG1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
103064233 (LIG1)
DNA replication proteins [BR:pbi03032]
Eukaryotic Type
DNA Replication Elongation Factors
Other elongation factors
103064233 (LIG1)
Prokaryotic Type
Elongation factors (archaeal)
Other elongation factors
103064233 (LIG1)
DNA repair and recombination proteins [BR:pbi03400]
Eukaryotic Type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
103064233 (LIG1)
NER (nucleotide excision repair)
Other NER factors
103064233 (LIG1)
MMR (mismatch exicision repair)
Other MMR factors
103064233 (LIG1)
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| SSDB |
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| Motif |
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| Other DBs |
NCBI-GeneID: NCBI-ProteinID: |
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| LinkDB |
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| Position |
Un
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| AA seq |
912 aa  
MQSNIRSFFQPLARIKPEKEKAEDNHLEDVLTSQKKLVNGSEVYEDFPVNSASKKAAKVL
NSDDEEDSVELDGKDTQADDSKLEPDCVPEQKISEESISPSTSPTTSSSPTSSGIPRRKT
ARKQLPKRKPEEDVNSHNNSHESRSTKRWKEDHSRDDSKDENGEKSMEVEEVKSENAKLV
EHKTDRNVKEEETSDSPKSSSKPISSFFAPKKSSVKTEKKQAPIVSENMPVPKDLNKVSN
HESNSMADNFLKPSLTPEPPEYNPTKSSYHPVHDACWGPGQKVPYMAVARSFEYIEEESA
RLKIIETLSNLFRSVIVLSPQDLLPCVYLCLNRLGPAYEGLELGIGKTILMKALAQATGR
QLDQIKAEAAEKGDLGLVAENSRTTQGTVFAPPKLGAAAVFGKLQAIGHMAGSSSMNKKI
DIIKSLFVACRHSEARYVARSLEGKLRIGLAEQSVLSALAQAASLTPPGQKFPPDVLDAA
KGKSVETRKAWLDERALIVKQAFCELPNYDIIIPVLLEHGVESLPQHCKITPGIPLKPML
AHPTKGIGEVLKRFEEAAFTCEYKYDGERAQIHILENGEVHIYSRNQENNTTKYPDIVTR
IPKVKNSTVKSCILDAEAVAWDPVSKQILPFQVLTTRKRKDVDAAEIRVQVCVYAFDMLY
LNGMSLVQKPLSQRRTLLHNSFTEVEGQFLFATSMDTSNTDEIAEFLERSIKDSCEGLMV
KTLEVDATYEIAKRSHNWLKLKKDYLEGVGDTLDLVVIGAYLGKGKRAGTYGGFLLACYD
EESEEFQSICKIGTGFTDEDLEKLHLSLKDCVTPQPRPYYRWGGTAEPDHWLEAQYVWEV
KCADLSISPIHRAASGLVDEEKGISLRFPRFLRIRDDKKPEEATSSAQVAELYRKQQQIQ
NQVSLEKDDDFY |
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| NT seq |
2739 nt  +upstreamnt +downstreamnt
atgcagagcaacataagatcattcttccagcctctggcacgaataaagcctgaaaaagaa
aaagcagaagacaaccacttggaagatgtgctcacttcacaaaagaaattagtaaatggt
tcagaagtctatgaagacttcccagtgaattctgcatctaaaaaagctgccaaggtactt
aatagtgatgatgaagaggattctgtggaattagatggaaaggatacacaagcagatgac
agcaagttggaacctgactgtgttcctgagcaaaagatctctgaggagagcatctctcca
agtaccagcccaactacctccagttcacccacatcttctggtattccaaggcgcaaaact
gcccgcaagcagctccctaaacgtaaaccagaggaagatgtcaacagccataataattcc
catgaaagtcgcagtaccaaaagatggaaggaagatcacagtagagatgattctaaagat
gaaaacggtgagaaatccatggaagtggaagaagtgaaaagtgaaaatgcaaaattggtg
gagcataaaacagacagaaatgtaaaggaagaagaaacctcagattcccctaagtcatct
agcaagcccatttctagtttttttgctcccaagaaaagttctgtgaagacagaaaaaaag
caagcacctatagtatcagaaaacatgccagtaccaaaggaccttaataaagttagtaat
catgagtccaacagcatggctgacaattttctcaagccatctcttacacctgaacctcca
gagtacaaccctacgaagagcagctatcatcctgttcatgatgcttgctggggccctggc
caaaaggtaccatacatggctgtggctcgttcttttgagtatattgaggaggaatctgcc
cggttgaaaattatagagaccctgagcaatctctttcgttctgtgattgtcctgtctcca
caagacctgctcccctgtgtctacctctgtctcaatcggttaggcccagcgtatgaaggc
ctagaattaggcattggcaaaaccatcctcatgaaagcgctggcccaagccacaggtcgg
caactggaccaaatcaaggcagaggcagcagagaagggagatctaggattagttgctgaa
aacagtcgcacaacacaaggaaccgtgtttgccccacccaagcttggtgctgctgctgtc
tttggcaaactgcaggcaattgggcacatggcaggaagctcttctatgaacaagaaaatt
gacattatcaagtctctgttcgttgcatgtcgccactcagaggctcgttatgttgctcgg
tcattagaaggaaagttacggattgggctagcagagcagtctgtcctctcagctcttgcc
caggcagcatcgctcactcccccaggacaaaaatttcccccagatgttttggatgctgca
aagggcaaatctgtagaaacacgcaaagcctggctggatgagagagccttgattgttaag
caggccttctgtgaactgccaaattatgacatcatcatacctgtcctcttggagcatggt
gtggagagcttgcctcagcactgcaagatcactccagggattcccctgaagcccatgctg
gctcatccaaccaaaggaattggggaggtattaaagcgctttgaagaggcagccttcact
tgtgaatacaaatatgatggggagcgggcacagatccacattctagagaatggagaagta
catatttatagccgaaaccaagagaacaacacaacaaagtaccctgatattgtcacccgt
attcccaaggtgaaaaacagcactgtgaagtcatgcatcttggatgcagaggcagtggcc
tgggaccctgtttcaaaacagatcctgccattccaagtattgaccacccgcaagcgcaag
gatgtggatgctgcagaaatccgagtgcaggtttgtgtgtatgcattcgacatgctctac
cttaatggaatgtctctagtccagaaacctctgtctcagcgccggaccttactgcataat
tctttcactgaggttgagggccagttcctctttgccacttccatggatactagtaatact
gatgagatagcagaattcctggaacgctctatcaaagactcatgtgaagggttaatggtg
aaaacactggaagtggatgctacatatgaaattgcaaagagatcacacaattggctgaag
cttaaaaaagattatctggaaggtgttggtgacacccttgatctggtggtgattggtgcc
tacctgggcaagggcaagcgggcaggcacgtatggaggtttccttctagcatgttatgat
gaggaaagtgaagagttccagagtatctgcaagattggcactggattcacagatgaggat
ttggagaaacttcatctctcactcaaggactgtgtgactccacagccacgaccatattat
cgttggggtggaacagctgaacctgatcactggttggaagcccagtatgtctgggaagtg
aagtgtgctgatttatccatttctcccatccacagagcagcatcaggtttggtggatgaa
gaaaagggcatctccttacgctttcccagattcctgcgcatccgagatgacaagaaacca
gaggaggccactagcagtgctcaggtggctgaactttatcggaagcagcagcagatccaa
aatcaagtatcactggaaaaagatgacgacttctactaa |
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