Paracoccidioides lutzii Pb01: PAAG_02452
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Entry
PAAG_02452 CDS
T02230
Name
(RefSeq) DNA ligase
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pbl
Paracoccidioides lutzii Pb01
Pathway
pbl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PAAG_02452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbl03400
]
PAAG_02452
Enzymes [BR:
pbl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
PAAG_02452
DNA repair and recombination proteins [BR:
pbl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
PAAG_02452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
LIG3_BRCT
RTT107_BRCT_5
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
9098995
NCBI-ProteinID:
XP_015701694
UniProt:
C1GUX9
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MDSDGGNEVDDVRRVADTEADLDEKYPNRPRNHSPTLPFHDLFLTLFNPLNENKKRPTGP
AVARRKVGPHGLGAAVHLSPQELRRDIIQRFISRWRKEVGNDVFPAFRLIIPGKDRDRAM
YGLKEKAIGKLLVKVMKIDKNSEDGFSLLNWKVPGQTFASRMAGDFAGRCFEIISKRPMR
TEVGDMTIEEVNEQLDKLSAASKEDEQVPILEYFYRRMNPEELMWLIRIILRQMKVGATE
RTLFNLWHPDAEALFSISSSLRRVCWELYNPNVRLEGDEAKVTLMQCFQPQLAQFQVQSF
DRMIQRMSLAEDDPTFWIEEKLDGERMQLHMQTDDSIPGGKRFAFWSRKAKEYTYLYGNG
LFDENGALTRHLQNAFADGVQSIILDGEMITWDPEHDAIVPFGTLKTAALAEQRNPFSTG
QRPLFRIFDILYLNGRALTRYILRDRRRALEASVIPVHRRFEIHTYEIGRSTADIEPLLR
KVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPDYMTEFGESLDCVVIGGYYGSGRRGGA
LSSFLCGLRVDGAHAKKGDKPTKCYSFCKVGGGFTAADYANIRHHTDGKWMDWDPKTPPT
EYIELGGGDAQHERPDVWIKPEDSVVLCIKAAQVTPSDQFRLGLTLRFPRFKRLRMDKDW
QSALTVQEFMDFKSNVEKEVKEKELRFDDTSRPRHKKSTKKPLTVAGYEGGKKAAYASPS
GKLFDGLNFFIMTESVQEPKKTKAQLEQLVKANGGKLYQTNTVAENTICIADRRTVKVAS
LQKNAKENVVRPSWLFDCLKQNEIDQGLPDLLIPLEPKHMFFTTADQEEEIAGNVDKYSD
SYARDVDVSELTKLLDEMPTVPNTTPSGISQLESHIGHMLDQTASFNNSSPGWLFKGLVI
YFAAPRPASPSLCSSLRNDNLKEEKQRLPQCLYLASNLVKFAGGQVITDDNDMTDPRITH
IVIDSNIDDKTTTTTEISAIRRKIATRTGMNKRIPHLVGVEWVEESWREKTLVDEDRFAP
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggattcggatgggggaaatgaagtagatgatgtgcgacgggtagctgacactgaagct
gaccttgacgagaaatatccgaatcgccctcggaaccactctcccactctgcctttccat
gacttatttctgactctatttaaccctcttaatgagaacaaaaagcgtccaaccggacca
gcagttgctcgaaggaaagtgggaccacatggacttggtgcagccgtccatcttagcccc
caagagttgcgaagagacatcattcagcgatttatttcgcggtggcgaaaggaagtaggg
aatgatgtattccctgcctttcgattgatcattccagggaaagatcgggacagggcgatg
tatggattgaaggagaaagccattgggaaactgttagtgaaagttatgaaaattgataag
aactctgaagacgggtttagtttgttgaactggaaagtacccgggcagacttttgcaagc
agaatggcgggtgattttgcgggtcgttgtttcgaaatcatttcaaagcggccgatgagg
actgaggtgggcgacatgacaatcgaggaagttaacgaacaactggataaactttctgca
gcttcgaaagaggatgaacaggtcccaattcttgaatatttttatagaaggatgaatccc
gaggagttgatgtggcttatccggattattttgaggcaaatgaaagttggtgccacagaa
cggacgctcttcaatttgtggcatcccgatgcagaagcattgtttagcatttctagcagt
ctccggcgagtttgctgggagctatataatccgaatgtccgtcttgaaggggatgaggct
aaagtcacgctgatgcaatgttttcaaccgcagctcgcgcagtttcaagtgcagtcgttt
gaccgcatgattcagaggatgagtctagctgaggacgatccgacattttggattgaagaa
aaattagacggagaacgtatgcagcttcacatgcaaacagacgactcaatacccggaggg
aagaggtttgccttttggtctcggaaggcaaaagagtacacatatttgtacggaaatgga
ttgtttgacgagaatggtgctctcacgagacaccttcagaacgcgttcgctgatggagtc
caaagcatcattctagatggagagatgatcacatgggatccggagcatgatgcgattgtt
ccgtttggcactcttaagactgccgcactggcggaacaaaggaatcccttctcgacagga
cagagaccattatttcgcatatttgatattctatatctgaatggtcgagccctcacaaga
tacattctacgggaccgcagaagagcccttgaagcaagtgtcattccagttcatcgtcgt
tttgaaatacacacctatgaaataggccgcagcacagctgatatcgaacctctgcttcgg
aaagttgttgctgaagcatctgaaggtcttgtcctgaagaaccccaactccccttaccga
ctaaacgagcgccatgatgattggatgaaggtgaaacctgattatatgacagagtttgga
gagtctcttgactgcgttgttattgggggatattacggttccggccgtcgaggcggcgct
ttatcaagctttctatgtggactaagggttgatggtgcgcacgccaaaaagggagataaa
cccacaaaatgctattcattttgtaaggttgggggtggattcactgcagctgattatgcc
aatattcgccatcacaccgatgggaagtggatggattgggatcccaaaacaccccccact
gaatatattgagcttggtggaggtgatgcacagcatgaacgtcctgatgtatggataaag
cccgaggattcggttgtgctatgtataaaggctgcacaagttaccccaagtgaccaattc
cgtcttggtctcaccctgcggtttcctcgttttaaacgactacgtatggataaagattgg
cagagtgcattaacagtacaggagtttatggatttcaagtcaaacgtcgaaaaggaggtg
aaggaaaaggagctcaggtttgacgatactagcagaccccgtcataaaaaatctacgaag
aagccgttgacagttgctggctacgagggaggtaaaaaagctgcatatgctagcccctca
gggaagctattcgatgggctgaatttctttatcatgaccgagtccgtgcaagaacccaaa
aagaccaaggctcagctcgaacagcttgtgaaagctaatggcggcaaactgtatcagacg
aacacagtggcggaaaatacaatttgcattgcagatcgcaggacagtaaaagtagcttca
ctacaaaagaacgcaaaggaaaacgtagttcgcccatcatggctctttgactgtttaaaa
cagaacgaaatagaccaaggtctcccagacctgcttatccctttggagccaaaacacatg
ttcttcacaaccgcggatcaagaagaggaaattgccggaaatgtagacaaatactccgat
agctatgctcgagacgtcgacgtctcggaacttacaaagctccttgatgaaatgcccaca
gtccctaatacaactccctctggcatatcccagctggaatcccacatcgggcacatgcta
gatcaaacagcaagtttcaacaactcctctccagggtggcttttcaaaggactggtcatc
tactttgctgcgccacgacctgcttcaccatcactatgttcttcactacgaaacgataat
ttgaaagaagagaaacagcgtcttcctcaatgtctttatttagcctccaatctcgtaaaa
ttcgctggcggccaggtcataacagacgacaacgacatgacggacccacgcatcacgcat
atcgtaatcgactcaaatatcgatgataaaacgacaacgacgacggaaatttctgcgatc
aggcggaaaattgcaacccgcactgggatgaataagcgtattccgcatctggttggggtg
gagtgggtggaggagagttggagggaaaaaactctggtggacgaagatcgcttcgcaccc
aagtaa
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