Paracoccidioides brasiliensis: PADG_05602
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Entry
PADG_05602 CDS
T03549
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PADG_05602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbn03400
]
PADG_05602
Enzymes [BR:
pbn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
PADG_05602
DNA repair and recombination proteins [BR:
pbn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
PADG_05602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
LIG3_BRCT
RTT107_BRCT_5
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
22584501
NCBI-ProteinID:
XP_010760812
UniProt:
C1GEB6
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MDSDVENEVDDVRQGADTEADLDEKYPNRPRNHSPTLPFHDLFLTLFNPLNENKKRPTGP
AVARRKVGPHGLGAAVHLSPQELRRDIIQRFISRWRKEVGNDVFPAFRLIIPEKDRYRAM
YGLKEKAIGKLLVKVMKIDKNSEDGFSLLNWRLPGQTFASRMAGDFAGRCFEIISKRPMR
TEVGDMTIEEVNEQLDKLSAASKEDEQVPILEYFYRRMNPEELMWLIRIILRQMKVGATE
RTLFNLWHPDAEALFSISSSLRRVCWELYNPNVRLEGDEAKVTLMQCFQPQLAQFQVQSF
DRMIQRMRLAEDDPTFWIEEKLDGERMQLHMQTDDSIPGGKRFVFWSRKAKDYTYLYGNG
LLDENGALTRHLQNAFADGVQSIILDGEMITWDPEHDAIVPFGALKTAALAEQRNPCSTG
QRPLFRIFDILYLNGRALTRYILRDRRRALEASVIPVHRRFEIHTYEIGRSTADIEPLLR
KVVAEASEGLVLKNPNSPYRLNERHDDWMKVKPDYMTEFGESLDCVVVGGYYGSGRRGGA
LSSFLCGLRVDGAHAKKGDKPTKCYSFCKVGGGFTAADYANIRHHTDGKWMDWDPKRPPT
EYIELGGDDAQHERPDVWIKPEDSVVLCIKAAQVTPSDQFRLGLTLRFPRFKRLRMDKNW
QSALTVQEFMDFKSNVEKEVKEKELRFDDTRRPRHKKSTKKPLTVAGYEGGKKTAYASPS
GKLFDGLNFFIITESMQEPKKTKAQLEQLVKANGGKLYQTNTAAENTICIADHRTVKVAS
LQKNAKENVVRPSWLFDCLKQNEIDQGLPDLLIPLEPKHMFFTTADQEEEIAGNVDKYSD
SYARDVDVSELTKLLDEMPTVPNTTFSSISQLESHIGHMLDQTASFNNSSKGWLFKGLVI
YFAAPQPASPSLCSSLQNDNLKEEKQRLPQCLYLASNLVKFAGGQVITDDNDMTDPRITH
IVIDANTDDKTIMATEISAIRRKIATRTGINKRIPHLVGVEWVEESWRKKTLVDEDRFAP
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggattcggatgtggaaaacgaggtagatgatgtgcgacagggagctgacactgaagct
gaccttgatgagaaatatccgaatcgccctcggaaccactctcccactctgcctttccat
gacttatttctgactctatttaaccctcttaatgagaacaaaaagcgtccaactggacca
gcagttgctcgaaggaaagtgggaccacatggacttggtgcagccgtccatcttagcccc
caagagttgcgaagagacatcattcagcgatttatttcgcggtggcgaaaggaagtaggt
aatgatgtattcccagcctttcgattgatcattccagagaaggatcggtacagggcgatg
tatggattgaaggagaaagccattgggaaactgttagtgaaagttatgaaaattgataag
aactctgaagatgggtttagtttgttgaactggagattacccgggcagactttcgcaagc
agaatggcgggtgattttgcgggtcgttgtttcgaaatcatatcaaagcggccgatgagg
actgaggtgggcgacatgactatcgaggaagttaacgaacaactggataaactttctgca
gcttcgaaagaggatgaacaggtcccaattcttgaatatttttatagaaggatgaatccc
gaggagttgatgtggcttatccggattattttgaggcaaatgaaagttggtgccacagaa
cggacgctcttcaatttgtggcatcccgatgcagaagcactgtttagcatttctagcagt
ctccgccgagtttgctgggagctatataatccgaatgtccgtcttgaaggggatgaggct
aaagtcacgctgatgcaatgttttcaaccgcagctcgcgcagtttcaagtgcagtcgttt
gaccgcatgattcagaggatgaggctagctgaggacgatccgacattttggattgaagaa
aagttagacggagaacgtatgcagcttcacatgcaaacagacgactcgatacccggaggg
aagaggtttgtcttttggtctcggaaggcaaaagactacacttatttgtacggaaatgga
ttgcttgacgagaatggtgctctcacgagacaccttcagaatgcgttcgctgatggagtc
caaagcatcattctagatggagagatgatcacatgggatccggagcatgatgcgattgtt
ccgtttggcgctcttaagacagccgcactggcagaacaaaggaatccctgctcgacagga
cagagaccattatttcgcatatttgatattctatatctgaacggtcgagccctcacaaga
tacattctacgggaccgcagaagagcccttgaagcaagtgtcattccagtacatcgtcgt
tttgaaatacacacctatgaaataggtcgcagcacagctgatatcgaacctctacttcgg
aaagttgttgctgaagcatctgaaggtcttgtgctgaagaaccccaactccccttaccga
ctaaacgagcgccatgatgattggatgaaggtgaaacctgattatatgacagagtttggc
gagtctcttgactgcgttgtcgttgggggatattacggttccggccgtcgaggcggcgct
ttatcaagctttctatgtggactaagggttgatggtgcgcacgccaaaaagggagataaa
cccacaaaatgttattcattttgtaaggttgggggaggattcactgcagctgattatgcc
aatattcgccatcacaccgatgggaagtggatggattgggatcccaaaagaccccccact
gaatatattgagcttggtggagatgatgcacagcatgaacgtcctgatgtatggataaag
cccgaggattcggttgtgctatgtataaaggctgcacaagttaccccaagtgaccaattc
cgtcttggtctcaccctgcgatttcctcgttttaaacgactacgtatggacaaaaattgg
cagagtgcattgacagtacaggagtttatggatttcaagtcaaacgtcgaaaaggaggtg
aaggaaaaggagctcaggtttgacgatactcgcagaccccggcataaaaaatctacgaag
aagccgttgacagttgctggctacgaaggaggtaaaaaaactgcatatgctagtccctcc
gggaagctattcgatgggctgaatttctttatcataaccgagtccatgcaagaacccaaa
aagaccaaggctcagctcgaacagcttgtgaaagctaatggcggcaaactgtatcagacg
aacacagcggctgaaaatacaatttgcattgcggatcacaggacagtaaaagtagcttca
ctacaaaagaacgcaaaggaaaacgtagttcgcccatcatggctctttgactgtttaaaa
cagaacgaaatagaccaaggtctcccagacctgcttatccctttggagccaaaacacatg
ttcttcacaactgcagatcaagaagaggaaattgccggaaatgtagacaagtactccgat
agctatgctcgagacgtcgacgtctcggaacttacaaagctccttgatgaaatgcccaca
gtccctaatacaactttctctagcatatcccaactggaatcccacatcgggcacatgcta
gatcaaacggcaagtttcaacaactcctctaaagggtggcttttcaaaggtctggtcatc
tactttgctgcgccacaacctgcttcaccatcactatgttcttcactacaaaacgataat
ttgaaagaagagaaacagcgtcttcctcaatgcctttatttagcctccaatctcgtaaaa
ttcgctggcggccaggtcataacagacgacaacgacatgacggacccacgcatcacgcat
atcgtaatcgacgcaaataccgatgataaaacgataatggcaacggaaatttctgcgatc
aggcggaaaattgcaacccgcactgggatcaataagcgtattccgcatctggttggggtg
gagtgggtggaggagagttggaggaaaaaaactctggtggacgaagatcgcttcgcaccc
aagtaa
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