Paraburkholderia bonniea: QS306_11460
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Entry
QS306_11460 CDS
T09664
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pbon
Paraburkholderia bonniea
Pathway
pbon00550
Peptidoglycan biosynthesis
pbon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QS306_11460 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbon01002
]
QS306_11460 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbon01011
]
QS306_11460 (dacB)
Enzymes [BR:
pbon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QS306_11460 (dacB)
Peptidases and inhibitors [BR:
pbon01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
QS306_11460 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbon01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
QS306_11460 (dacB)
BRITE hierarchy
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
WJF89714
LinkDB
All DBs
Position
1:2632614..2634257
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AA seq
547 aa
AA seq
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MHALTTSPTSSLTRHAAPDGAALSNRPCAAAPSHRGLVRGAILLLACAALLGASPAEARK
KTAHPSVNVSTVLPPSVMAGLRQAKVPLSALSVVVEKIGSPTPIVALNAGQQMLPASTMK
LVTTYAGLSLLGPDYRWRTTAYTDGTVDSNGMLHGNLYLQGTGDPKLVPEELIDLVQKIR
KTGINGIDGSLVLDKRFFDPSTRDLPAFDSDLNAPYNVGPDPLLYAFKSLSFTLTPTPDG
TVTIEVLPALAQLQIDNQLRSSSGPCRNEATALAPSVTTNPGGTLSAQFQGDYPLRCGAR
TINIAVLDHTTFFSGGFLALWQQTGGTFNGTTLEGPVPPGAHLVATHRGPVLADVVRDIN
KFSNNTMARNLFLTIGAAMGKPPATPEQSARVIEDFLHRNGLPMEHLALENGSGLSRNEH
ISTLALADLLQNANASPVAQAFVESLPIAGVDGTMRKRLTARPVGGNAHIKTGTLRDVRA
IAGYVASADGNSYVVVSLINDDHAEAAQAVHDALLEWVYAGPSQPIAVPAAKARGKSRKN
PQRRAGH
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctctgactacttcgcccacttcttcgctgacccgccacgccgccccggatggc
gctgcattgtccaacagaccttgcgccgccgcaccatcgcatcgtggcctcgtgcgcggc
gcaatcctgctgctggcatgcgcggcgctgcttggggcatcccccgccgaagcacgcaaa
aaaaccgcccatccatccgtcaatgtcagtaccgtgctgccgccttcggtgatggcgggt
ttgcggcaagccaaggtgccgttgtcagcgctcagcgtcgtggtggaaaagatcggatcc
cccacccccatcgtcgcgctcaatgcgggccagcagatgctgcccgcttcgaccatgaag
ctcgtcacgacctatgcgggcctgtcgctgctcggtccggattatcgctggcgcaccacg
gcctacaccgatggcaccgtcgacagcaatggcatgctgcacggcaacctgtatctccag
ggcaccggggaccccaagctagtgccagaagagctgattgacctggtacagaaaattcgc
aaaacgggcattaatggcattgatggttcactggtgctcgacaagcgcttttttgatcct
tcgacgcgtgatctgccagccttcgacagcgatctcaacgccccctataacgtcggccct
gatccgctgctgtatgccttcaagtcgctttctttcactctcacgccaacacccgatggc
accgtcaccattgaagtgctgcccgcgctcgcccagttgcaaattgacaaccagttgcgc
tcaagcagcggaccatgccgcaatgaggccaccgcactcgcccccagcgtcacaacgaac
cccggcggcacactctcagcccagtttcagggtgactatccgctgcgttgtggcgcacgc
accatcaacatcgccgtgctggaccatacgaccttcttctctggtggctttctcgcgtta
tggcagcaaaccgggggcacgtttaacggcacgaccctcgaaggcccggtgccgccaggc
gcgcatctggtggcgacccatcgcggcccggttctagcggatgtcgtgcgggatatcaac
aaattcagcaacaacacgatggcgcgcaacctgttcctgaccatcggcgcggcgatgggc
aaaccgcctgctacgccagaacagtccgcccgtgtcatcgaagacttcctgcaccgcaac
gggctgcccatggagcatctagcgctcgagaacggctcgggactgtcgcgcaacgagcat
atttctacgctggcgctggctgacctgctgcaaaacgcgaacgccagcccggtagctcag
gcgttcgtcgaatcacttccgatagcaggcgtcgatggcaccatgcgcaagcgcctgaca
gcccggccagtaggtggcaatgcacacatcaagaccggcacgctgcgtgatgtgcgtgcg
attgcgggctatgtggcatcggcagatggcaatagctatgtggtggtcagcctgattaac
gatgaccatgctgaagccgcccaggccgtacacgatgcgctgctcgaatgggtctacgcc
ggaccatcgcaacccattgctgtaccggcggccaaagcgcgtggcaaatccaggaaaaac
ccgcagcgccgtgccgggcattga
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