Pectobacterium brasiliense: B5S52_03545
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Entry
B5S52_03545 CDS
T06364
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00470
D-Amino acid metabolism
pbra00550
Peptidoglycan biosynthesis
pbra01100
Metabolic pathways
pbra01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B5S52_03545 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B5S52_03545 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
B5S52_03545 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbra01011
]
B5S52_03545 (ddl)
Enzymes [BR:
pbra01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
B5S52_03545 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbra01011
]
Precursor biosynthesis
Amino acid ligase
B5S52_03545 (ddl)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
TTL
ATPgrasp_ST
ATP-grasp_3
ATP-grasp
ATPgrasp_Ter
ATPgrasp_YheCD
RimK
Motif
Other DBs
NCBI-ProteinID:
ARA75009
UniProt:
A0A086EGP7
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All DBs
Position
778042..778962
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AA seq
306 aa
AA seq
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MTEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGINAHAVDTRDVSVTTLKEEGFTKIFI
ALHGRGGEDGTLQGVLEFLGLPYTGSGVMASALTMDKLRTKQVWQAVGLPVSPYVALDRR
QYSETAANALLAKFTHLGLPLIVKPSREGSSVGMSKVNTLSELPAALEEAFRHDDDILIE
KWLSGPEYTVAILGDDVLPSIRIQPAGTFYDYEAKYLSDDTQYFCPSGLPDDQEQALAGL
AMAAYRAVGCSGWGRVDFMLDSDGAFYLLEVNTSPGMTSHSLVPMAARQRGLTFSQLVVK
ILELAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaagttgctgtattgcttggtggaacctctgccgaacgtgaagtgtcgtta
ctttccggtcaggcggttttggctggcctgaaagaagcgggcatcaacgcgcatgcggtt
gatacccgtgacgtctctgtgacgacgttaaaggaagaaggctttaccaagattttcatc
gccttacatggtcgtggtggtgaagatggtacattgcagggcgttctggagttcctgggg
ctgccttataccggtagcggcgtcatggcatctgcactgacgatggataaactccgcacc
aaacaggtgtggcaagccgtgggattaccggtgtcgccatacgtggcgctggatcgtcgc
caatattcagaaacggcggcaaacgcgctgctggcgaaattcacccatctcgggctgccg
ctgatcgtcaagccaagccgtgaaggttccagcgtggggatgagcaaagtgaatacgctg
agcgaactgcctgctgcactggaagaagcattccgtcacgatgacgatattctgatcgag
aagtggctgagcggcccagagtatacggtggctatcctgggtgatgacgtgttgccttct
attcgtattcagcctgcgggtacgttttacgattatgaagcgaagtatttatcggatgat
acgcagtatttctgtccgagtggtttgccggacgatcaagagcaggcgctagctggactg
gcgatggcggcttatcgtgcggtgggctgtagcggatggggacgcgtcgattttatgctg
gatagcgacggtgccttctatctgcttgaagtgaatacgtctccggggatgacgagtcac
agtctggttcctatggcagcgcgccagcgtgggctgactttctcgcaactggtcgtgaaa
attttagagctcgctggctga
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