KEGG   Pectobacterium brasiliense: B5S52_09585
Entry
B5S52_09585       CDS       T06364                                 
Name
(GenBank) conjugative coupling factor TraD, PFGI-1 class
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
pbra  Pectobacterium brasiliense
Brite
KEGG Orthology (KO) [BR:pbra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbra02044]
    B5S52_09585
Secretion system [BR:pbra02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   B5S52_09585
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87
Other DBs
NCBI-ProteinID: ARA76109
LinkDB
Position
complement(2086529..2088688)
AA seq 719 aa
MAQSQPVEVLLRPPVELYTVAVCAGAALLCLTAPWSLALSPDIGIGSALAFGVFGTLRWR
DAQVILRYRRSIRRLPRYVMTSRDVPVSQQRLFIGKGFRWEQKHTHRLMQTYRPEFRRYV
EPTSTYQLARRLEERLELAPFPLSQLPRLTTWDIPLNPVRPLPPVGGLPRLHGIEPDEVD
VSLPLGERVGHSLVLGTTRVGKTRLAELFITQDIRRKNHLGEHEVVIVFDPKGDADLLKR
MFVEARRAGRENAFYVFHLGWPEISARYNAVGRFGRISEVATRIAGQLSGEGNSAAFREF
AWRFVNVIARALIELGQRPDYLLIQRHVINIDALFIEYAQHYFARTEPKAWEVIVQIEAK
LNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLKSAVRYDKTYFDKIVASLLPLLE
KLTSGKIAQLLAPNYSDLSDPRPIFDWMQIIRKRAVVYVGLDALSDAEVAAAVGNSMFSD
MVSVAGHIYKFGIDDGLPGASADTKVPINVHADEFNELMGDEFIPMINKGGGAGIQVTAY
TQTLSDIEARIGNRAKAGQVVGNFNNLFMLRVRETATSELLTKQLPKVEVYTTTVVSGAT
DSSDIHAKTDFTSNTQDRISMSSMPMIEPSHVVQLPKGQCFALLQGGNLWKVRMPLPAPD
PDEIMPTDLQQLAGYMRQSYTDTGQWWQNQGSPTLQEHALPPELLDEDVDSLTDQSKAP
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggcacagtctcagccggtcgaggtactgctgcgtccccccgtagaactctataccgtt
gcggtttgtgccggagctgcattgctgtgcctgactgctccatggtctctcgcgctgagt
ccggacataggcatcggcagcgcactggccttcggagtttttggcacactgcgctggcgc
gatgcacaggtgatcctgcgctaccgacgcagtatccgtcgcctgccgcgttacgtgatg
accagccgcgacgtgccagtcagccaacaacgcttgttcattggcaaagggtttcgttgg
gagcagaaacacactcaccggttgatgcaaacctaccggcctgagttcaggcgttatgta
gagccaacatccacctaccagttggcccgacgtctggaggagcggctggagctcgcacca
ttcccattatcgcaactgccccgtcttacgacctgggatataccgctcaatccggtacgg
ccattaccgcccgttggcggcttaccgcgtctgcatggtattgagcctgacgaggtggac
gtcagcctgcccttgggtgagcgtgtcggccactccctggtactgggcaccacgcgcgta
ggcaaaacgcggctggctgaattattcatcacccaggatattcgtcgaaagaatcacctg
ggcgagcacgaagtggtcattgttttcgaccctaaaggcgatgcggatctgctcaaaaga
atgttcgtcgaggccagacgtgcaggcagagagaatgcgttctacgtgtttcatctgggg
tggccggagatcagtgcccgttacaacgcggtggggcgttttggtcgtatcagcgaagtc
gcgacccgcatcgcagggcagctttccggagagggtaactctgctgcattcagagaattt
gcctggagattcgtcaatgtgattgcacgcgcattgatcgaactggggcaacgacctgac
tacctgctgattcagcgccatgtcatcaatatcgatgcgttgttcatcgagtacgcccaa
cactacttcgcccgcacagaaccgaaagcctgggaggtcatcgtccagattgaagccaag
ctcaacgagaagaacattcccaggaacatgatcggccgcgaaaagcgcgtggtcgccctt
gaacaatatcttagccaggcccgtaactacgacccagtactggacggactgaaatcagcg
gttcgctacgacaaaacctatttcgacaagatcgtcgccagcctgctacctctgcttgaa
aaactcaccagtggcaaaatcgcccagttgctggcaccgaactactcggatctgagtgac
cccaggccgattttcgactggatgcagatcatcaggaaacgcgcagtcgtctacgtcgga
ctcgatgcgctctccgatgccgaagtcgccgctgcggtgggcaactcgatgttcagcgat
atggtctctgtggccggacacatctataaattcggcatcgacgatggcctgcccggtgca
tcggctgacaccaaagtaccaatcaatgttcatgccgatgaattcaatgaactcatggga
gacgaattcatcccgatgatcaacaaaggcggcggtgctggcatccaggtcaccgcttac
actcaaacactgagcgatattgaagcccgcatcggcaatcgcgccaaagccggtcaagtc
gtcggcaatttcaacaacctgttcatgctgcgcgtgcgcgagacagccacctccgagctg
ctcacaaaacagttgcccaaggtggaggtctacacgacgaccgtggtcagcggcgcgaca
gacagctccgacatccacgccaaaaccgacttcaccagcaacacacaggatcgcatcagc
atgtcgagcatgccgatgattgaaccgtcccatgtggttcaacttccgaagggacagtgc
ttcgcgctgcttcaaggcggaaacctgtggaaagtccgcatgcccctgcctgcccccgat
ccagatgaaatcatgccgacggatcttcagcaattggcaggctacatgcgtcaaagctac
accgatacgggtcaatggtggcagaaccagggatcgcccacgctgcaggagcacgctcta
ccgcctgaattgctcgatgaagatgtcgacagtcttaccgaccagagtaaagcgccatga

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