Pectobacterium brasiliense: B5S52_13300
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Entry
B5S52_13300 CDS
T06364
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pbra
Pectobacterium brasiliense
Pathway
pbra00550
Peptidoglycan biosynthesis
pbra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
B5S52_13300
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbra01002
]
B5S52_13300
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbra01011
]
B5S52_13300
Enzymes [BR:
pbra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
B5S52_13300
Peptidases and inhibitors [BR:
pbra01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
B5S52_13300
Peptidoglycan biosynthesis and degradation proteins [BR:
pbra01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
B5S52_13300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
ARA76805
LinkDB
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Position
complement(2944643..2945848)
Genome browser
AA seq
401 aa
AA seq
DB search
MKTTPFLTRLTSFSVGTVLLVGLVPFTYAEQLPAVPQIDAKAYILIDHHSGKVLAESNAD
ERLDPASLTKIMASYVIGQAIKSGKIRPTDEVTVGKDAWATGNPALRGSSLMFLKPGDRI
PVSELNKGIVIQSGNDASIALADYVAGSQDAFVSLMNNYAKALNLTNTNFRTVHGLDAPG
QYSTARDMALLGQALIRDVPEEYALHKEKEFTFNNIRQPNRNRLLWSTNLNVDGVKTGHT
SGAGHNLVASATEGNMRLISVVLGAQTDAIRFRESEKLLTWGFRFFETVTPIKTDAPFTT
QRVWFGTEKEARLGVAQDAALTIPKGQMKNLKASFTLNQPQLAAPLTKNQVVGTIDFQLD
GKSIGQRELVAMDDIPEAGFFSRLWDTVVMKVQQWFGGLFS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaactcctttcctgaccagactcacgtctttctctgtaggtacggtattgctt
gttggtttagtgccattcacctatgcggaacagttgccagcggtgccgcagattgatgct
aaagcctatatcctgatcgatcaccacagcggtaaagtgctagcggaaagcaatgctgat
gagcgtcttgatcctgccagtctgacaaaaattatggcgagctatgtgattgggcaggcg
atcaaatccggtaaaattcgtccgacggatgaagtgaccgtcggaaaagatgcctgggca
accggcaatcctgcgttgcgtggctcgtcgctgatgttccttaagccgggcgaccgcatc
cccgtttctgagttaaataaaggcattgtcattcagtccggcaatgatgccagcatcgcg
ctggcggattacgtcgcgggtagtcaggatgcgttcgtgagcctgatgaacaattatgcg
aaggcacttaacctgacgaatacgaattttcggaccgtgcacggtctcgatgcgcctggg
cagtacagcaccgcacgtgatatggcgctgttagggcaggcgctgattcgcgatgtgccg
gaagaatacgcgttgcacaaggaaaaagagttcaccttcaataacattcgccagcctaac
cgcaaccgtctgctgtggagcaccaatctgaatgtagacggtgtgaaaactggccatacc
agcggggcaggacacaatctggtggcctcggccaccgagggcaatatgcgcctgatttcc
gtggtgctaggggcgcaaacggatgccattcgcttccgtgaaagtgaaaaactgctcacc
tggggcttccgctttttcgaaacggtaacgcctatcaagacggatgcgccttttactacg
cagcgggtctggtttggtactgagaaagaggcacgactcggcgtcgcacaggatgctgcg
ctgaccattccgaaagggcaaatgaagaacctgaaagccagctttacgctaaatcagccg
cagcttgccgcaccactgaccaagaatcaggttgtcggcactatcgacttccaactggac
ggcaagagcatcggacagcgcgaactggtcgcgatggatgatatccccgaggccggtttc
tttagccgcctctgggatacggtggtgatgaaggtgcagcagtggttcggtggactattc
agctaa
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