Pseudonocardia broussonetiae: HOP40_08165
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Entry
HOP40_08165 CDS
T07210
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pbro
Pseudonocardia broussonetiae
Pathway
pbro00550
Peptidoglycan biosynthesis
pbro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HOP40_08165 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbro01002
]
HOP40_08165 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbro01011
]
HOP40_08165 (dacB)
Enzymes [BR:
pbro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HOP40_08165 (dacB)
Peptidases and inhibitors [BR:
pbro01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HOP40_08165 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbro01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HOP40_08165 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Transpeptidase
DUF6484
Motif
Other DBs
NCBI-ProteinID:
QJY45773
UniProt:
A0A6M6JF99
LinkDB
All DBs
Position
complement(1651097..1652515)
Genome browser
AA seq
472 aa
AA seq
DB search
MGFGGRIGDTLRVPGRGVRRAVAVLTVLVLAGGVGSAVSLTAPTLVSDLGLTGAPAALEP
TEPVPALGPLAATAPPPTTAGLEAALGPAVEEMPGRFTGTVLDPVTGEVLWASDADRALV
PGSTAKILTAAAALLTLNPTDGFVTRVVAGAEPGSVVLVGGGDPTLTALPEGEDGTYPGA
ARLAELAAEVQQAMPGPIDTVVVDTSRYDGPTSAPGWDPADVGAGFVAPIVPLMLDGGRA
DPTLQDGPRTTEPAAEAGRALARLLGADDVEEGTAAPDAQRLGSVTSAPFSELVEHVMRT
SDNVLAEALAREVAIARGGQPTFAGAAEQTLAALTQAGFDPSGAVLVDGSGLSTDDEVPA
RVLGTLLTAAATPAEGDRDTDFLRPLVTGLPVAGGDGTLDDRFGAGAPSSPGRGLVRAKT
GTLTNVSSLAGLVTDADGRLLVFAFMSNGASPATVRPRLDALAAELSGCGCT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgggtttcgggggccggatcggtgacacgctgcgcgtacccggtcgcggagtgcgacgg
gcggtcgcggtgctcaccgtgctcgtgctggccggcggagtgggcagcgccgtctcgctg
acggccccgactctcgtctccgacctcgggctgaccggcgcgccggccgccctcgagccc
acggagccggtgcccgcgctgggcccgctggccgccaccgcaccgccgccgaccaccgcc
gggctggaggcggcgctcggcccggccgtcgaggagatgccgggccgcttcaccggcacc
gtcctcgaccccgtcaccggcgaggtcctgtgggcctccgacgccgaccgcgcgctggtg
cccggctccaccgcgaagatcctcacggccgccgccgcgctgctgacgctcaaccccacc
gacggcttcgtcacgcgcgtcgtcgccggggcggagccgggcagcgtcgtgctggtcggc
ggcggcgacccgacgctcaccgcgctccccgagggcgaggacggcacctaccccggcgcc
gcgcggctggccgagctcgccgcggaggtgcagcaggcgatgcccggaccgatcgacacg
gtcgtcgtcgacaccagccgctacgacggccccacctcggcccccggctgggacccggcc
gacgtcggcgccgggttcgtcgccccgatcgtgccgctcatgctcgacggcggccgcgcc
gacccgacgctgcaggacggcccccgcaccaccgagcccgccgcggaggccggacgggcg
ctggcccggctgctcggcgccgacgacgtcgaggagggcaccgccgcccccgacgcccag
cggctcggctcggtcacgtcggcgccgttcagcgagctcgtcgagcacgtcatgcgcacc
tcggacaacgtgctcgccgaggcgctggcccgcgaggtcgcgatcgcgcggggcgggcag
ccgacgttcgccggcgccgccgagcagaccctcgccgcgctcacccaggccgggttcgac
ccgtcgggcgccgtcctcgtcgacggcagcgggctctccaccgacgacgaggtgcccgcc
cgcgtgctcggcacgctgctcaccgcggcggccaccccggccgagggcgaccgcgacacc
gacttcctgcgcccgctcgtcaccggcctcccggtggcgggcggcgacggcacgctcgac
gaccggttcggcgccggggccccgtcgtcgccggggcgcgggctggtgcgggccaagacc
ggcacgctgacgaacgtcagcagcctcgcgggcctggtcaccgacgccgacgggcggctg
ctcgtcttcgcgttcatgtcgaacggggcgtcgcccgcgaccgtgcggccacgcctcgac
gcgctggccgccgagctgagtggctgcggctgcacctga
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