Pseudonocardia broussonetiae: HOP40_32175
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Entry
HOP40_32175 CDS
T07210
Name
(GenBank) DUF87 domain-containing protein
Organism
pbro
Pseudonocardia broussonetiae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
TrwB_AAD_bind
DUF87
TraG-D_C
AAA_10
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QJY49849
UniProt:
A0A6M6JTU2
LinkDB
All DBs
Position
complement(6658827..6663926)
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AA seq
1699 aa
AA seq
DB search
MPVLSPPAQSSAALPEVVIGVIARYVAAQLVDRSAGHCVRIDSIRPEDGLALVAALRRGV
PADALDVYLLAESRDDADGRTSIPAERAVELRNRKLRVLLLLVPIGSGSAASSLDNSFER
IDVATLLRAAGDELVAGLDEELRSAVNRVARALSRSRPVEAWARYVAAVTVDPTWETVGA
ELSVVGMVPDLGGPELVPRLDRNVRCVRAIARPRRAVAPVADRLDTAGLQEGSERERITR
YLSRPDVDLSDVPTWAAALVASSLAPTFDGWPLAEQHSVDADRVVVTPFLKEDGALRTGT
QLRQQSPGELPYAEAGPDDPASVKLNWKTEPPRPDGIDRWLIEALPPEDLRDADTEPLAT
QSVKGDKRTATVRISFDEENLTAGALLMLRLTALDSAGQPVLLTDGSVAVQESQQFAVRW
EADIVPGATRRASALSLPLARIGAALDGQDDLDLESPTWDEAESEFTVRVGGRRTALLAT
SPALTGLQRRIMADPGPERAVAWEAAGRLGEVVGAADMTPIPGTLPLALADRRRRLFEEL
ASRWPRDIPETLHWDADLRSEVLAYCQSYRRALDSVPDEQTRVSLLTLDTVMLSVDTAGG
ASIATVIVLPLHPLRLAWFAGYDAVLHEWAEALTRAGTRTERRRSVDADLAGRVTPANLP
HVVLSPEPKAYVYTREATLGTGIYLNPEEPEPGAAVQAVFDVLGLGRRDVSSSVPPAIVA
ERLTAYRRVHPGQESLRLLAFNPGSGELLANALASSVLAGQDEEDDEVGQAPARVEIVAF
SRRRSLTDPLPALTELQADVAVRQVQGTRSYLTPLLGLSVRPAEQLSSETSAAHLGVLAD
LARISATGRSELPSVASSFHNLLTPTTNLRLAASETIEWQTSAALRSRKGVGAAEAVDAH
RAYSAALAAQLGGGTGTAVTAALRDGEQATLNAAHDRADWVLTLDRHLGIDLFTAGAATD
ETYILDYAPDFLEGLGPRLTVTTAHRKEVQRLLADAMGELHLAAVDESVRAVLHHLQIVS
GRLALRLIGRSTLATEAVSLAALMAYLGARGDLRDTIVVPVDAHLDVFGDAVAGGVQRCD
VLLVRVTARTMRMECVEVKSRRAAVLPAQLADEIVDQLDATEDMLRNTFFRTDPPRIDAD
LQRARLVGILRHHAERAVAMGLLGAARRADAERLFERLEDGQLVPEFPKTGYLVSLGDQP
DVPREHRGVPIHVVTAADLGPAGLASVAGPPGGPDPDPRPGPDSEPDPDSGPGPGPGPGP
DSGPGPDSGPGPDSDPGPDSDPGPDSDPGPEPHPDPGGADPGSYPDHTSGPGGPGTAEPA
SAPPARPHPSPEPPRPVADSADATEAEEPADQPGPAGDFPAVVDVHLGQDGNAAEVRWRI
STSGSPHMFVLGIPGQGKSVTTRRVLDSFADQGLPALVLDFHGDMAADPAGGAAVLDAAE
GLALSPFELRDDDHSRYAEAAWELSEVIGYVCDLGEIQQNVVYEAVRDLYREHGFGSIGG
PTGLPTMTGLAEVVAERERGGRGRNVAARLRPLTDFGLFVDRPDERGFADLLRSGVVLDV
HGLMEQVQLAAGAFVLRKVYREMFRWGQTAQLRLAVVLDEAHRLARDVTLPKIMKEGRKY
GVAVVVASQGVDDFHRDVLGNAGTKVVFRCNFPQSKKVAGFLRGRTGQDMSTALENLGVG
QAFVSTPERAEARKVFMAR
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgctgtccccgccggcccagtcgagtgcggccctgccggaggtggtgatcggc
gtcatcgcccgctacgtcgccgcgcagctcgtcgaccgcagcgccgggcactgcgtccgg
atcgacagcattcgccccgaggacgggctcgcgctcgtcgctgcgctccggcggggcgtt
ccggccgacgcgctggacgtgtacctgctggccgagtcccgcgacgacgccgacggtcgc
acgtcgatcccggccgagcgtgccgtcgagctgcgcaaccgcaagctgcgcgtgctgctg
ctgctcgtgccgatcggcagcggctcggcggccagctcgctcgacaacagcttcgagcgg
atcgatgtcgccacgctgctgcgggcggccggggacgagctggtggccggcctcgacgag
gagctccgctccgcggtcaaccgggtggcgcgggcgctgagccggtcacggccggtggag
gcgtgggcgcgctacgttgccgcggtgacggtcgatccgacctgggagacggtgggagcc
gagctctcggtcgtcggcatggtcccggacctcggcggaccggaactggtgccgcgcctg
gaccgcaacgtgcgctgcgtgcgcgccatcgcccgaccgcgccgcgccgtggcaccggtg
gcggaccggctcgacaccgcaggcctgcaggaggggtccgagcgcgagcggatcacccgc
tacctgtcccggcccgacgtcgacctgtcggacgtgccgacctgggcggccgcgctggtc
gcgtcgtcgctcgcccccaccttcgacggttggccgctggccgagcaacacagcgtcgac
gccgatcgcgtcgtcgtcacgccgtttctcaaggaggacggcgcgctacgcaccggcacc
cagctccgccagcagtcaccgggcgagctgccctacgccgaggccgggccggacgatccc
gcgtcggtaaagctgaactggaagaccgagccgccgcgcccggacggcatcgaccgttgg
ctgatcgaggcgctacctcctgaggacctgcgcgacgccgacacggagccgctcgccacc
cagtcggtgaagggggacaagcggacggcgacggtgcggatctccttcgacgaggagaac
ctgacggccggtgcgctcctgatgctgcggctcaccgccctcgactccgccgggcaaccc
gtgctgctcaccgacggctcggtcgccgtccaggagagccagcagttcgcggtgcggtgg
gaggcggacatcgtgccgggcgccacccgccgggcgtcagcgctgtcgctgccgctcgcc
cggatcggcgccgcgctcgacgggcaggacgacctcgacctcgagtcgcccacctgggac
gaggccgagtcggagttcaccgtgcgggtcggcggtcggcggaccgcgctgctcgccacc
agccctgcgctcaccgggctccagcgccggatcatggccgatcccggcccggaacgggcc
gtcgcatgggaggccgcaggccgcctgggtgaggtggtgggcgccgccgacatgacaccg
atccccggcacgctcccgctcgcgctggccgaccgcaggcgccgcctgttcgaggagctc
gcctcccggtggccccgcgacatcccggagacactgcattgggacgccgacctgcgctcc
gaggtgctcgcctactgccagagctaccggagggccctcgactcggtccccgacgagcag
acccgggtctccctgctgacgctcgacacggtgatgctctccgtcgacacagcgggtggc
gcctccatcgccaccgtgatcgtgttgccgctgcacccgctgcggctcgcctggttcgcc
ggctacgacgccgtcctccacgagtgggccgaggctctcacccgggccggcacccgcacc
gaacggcggcgctcggtcgacgccgacctggccgggcgggtgaccccggcgaacttgccg
cacgtcgtgctcagccccgaaccgaaggcgtacgtctacacgcgggaggccacgctcggt
accggcatctacctgaacccggaggagcccgaacccggtgcggccgtccaggcggtcttc
gacgtgctcggcctgggccgccgcgacgtgagttcgagcgtgccgcccgcgatcgtcgcc
gagcggctcacggcgtaccgccgcgtccatcccggtcaggagtcgctgcgcctgctggcg
ttcaaccccggctcgggagagctgctcgcgaacgcgctcgcttcctcggtgctcgccggg
caggacgaggaggacgacgaggtcgggcaggcgccggcgcgcgtcgagatcgtcgcgttc
agcaggcggcgctcgctcaccgacccgctgccggcgttgaccgagttgcaggccgacgtc
gccgtccgccaggtgcaggggacccggtcctacctcaccccgctgctggggctgagcgtg
cggcccgccgagcagctgtcgtcggagacctcggccgctcacctgggtgtgctggccgac
ctcgcccggatcagcgcgacgggccgatccgagctcccctcggtggcgtcgtcgttccac
aacctgctcacgccgacgacgaacctccggctcgccgcgtccgagacgatcgagtggcag
acctcggccgcgttgcgctcgcgcaaaggggtcggcgccgccgaggcggtggacgcccac
cgggcctacagcgcagcgctggccgcccagctcggtggaggcaccggcacggccgtcacc
gctgccctgcgcgacggcgagcaggccaccctgaacgcggcgcacgaccgggccgactgg
gtgctgacgctcgaccggcacctcggtatcgacctgttcacggccggtgcagccacggac
gagacctacatcttggactacgcccccgacttcctggagggcctcgggccgcggctcacc
gtcaccaccgcacaccgcaaggaggtccagcggctgctggcggacgcgatgggggagctc
catctcgccgccgtcgacgagtccgtccgggccgtcctgcaccacctccagatcgtctcg
ggacggctcgccctgcgtctgatcggccggtccacgctcgcgaccgaagccgtgagcctg
gcggcgttgatggcctacctcggcgctcgcggcgaccttcgggacacgatcgtcgtgccc
gtcgacgctcacctcgacgtcttcggggacgctgtggcgggcggcgtacagcggtgtgac
gtcctgctcgtccgcgtcaccgcccgcacgatgcggatggagtgcgtcgaggtgaagtcg
cggcgggccgccgtgttgcctgcgcagctggccgacgagatcgtggaccagctcgacgcc
accgaggacatgctgcgcaacacgttcttccgcaccgacccgccgcgcatcgacgccgac
cttcagcgtgcccggttggtgggcatcctgcggcaccacgccgaacgggccgtggcgatg
ggcctgctgggcgcggcccggcgggctgacgccgagcggttgttcgagcggctggaggac
ggccagctggtgcctgagttcccgaagaccgggtatctcgtgagcctcggtgaccagccc
gacgtgccgcgcgagcaccggggcgtcccgatccacgtggtgaccgcggccgacctcggt
cccgcggggctggcctcggtcgcgggaccgccgggtggcccggaccccgacccgcgaccg
ggtcccgattcggaaccagaccctgattcgggacctggacctggacccggtccgggacct
gactccggtccgggacctgactccggtccgggacctgactccgatccgggacctgactcc
gatccgggacctgactccgatccgggacccgagccccacccggacccgggtggcgccgac
ccgggctcctaccccgaccatacttccggcccgggagggcccggaacggccgagccagcg
tcggcgccgcccgcccgcccgcatccgtctcccgagcctccgcgtccggtggcggactcg
gccgacgcgacggaggcggaggagcctgcagaccagccggggccggccggcgactttcct
gcggtagtcgacgtccacctgggccaggacggcaacgcggcagaggtgcgatggcggatc
agcacgtctggaagcccgcacatgttcgtgctgggcatcccaggtcagggcaagtccgtc
accacccggcgggtgctcgactcgttcgccgatcagggccttcctgcactggtcctggac
ttccacggcgacatggcggccgatccggccggcggcgccgccgtgctggacgccgcggag
ggcctcgccctgtcgcccttcgagctgcgcgacgacgaccactcccgctacgcggaggcg
gcctgggagctgtcggaggtgatcggctatgtctgcgacctcggtgagatccagcagaac
gtggtctacgaagcggtgcgggacctgtatcgggaacatggattcggctcgatcggggga
ccgacggggctgccgacgatgaccgggttggccgaggtcgtggccgaacgggaacgcggc
ggacggggccgcaacgtcgcggcccgcctgcgtcccctcacggacttcgggctgttcgtc
gaccggcccgacgagcgggggttcgccgatctcctgcggtccggtgtggtgctggacgtc
cacggtttgatggagcaggtgcagctggcggcgggtgccttcgtcctgcgcaaggtctac
cgggagatgttccggtgggggcagaccgcccagctgcggttggccgtcgtcctcgacgag
gcccatcgactcgcccgggacgtgacgctgcccaagatcatgaaggagggccggaagtac
ggcgtggccgtcgtcgtcgccagccagggcgtcgacgacttccaccgcgacgtgctcggc
aacgccgggacgaaggtggtgttccggtgcaacttcccgcagagcaagaaggtggccggg
ttcctgcgcggacggaccggtcaggacatgtcgacggccctggagaacctcggtgtcggc
caggctttcgtgtccaccccggaacgagccgaggctcgcaaggtcttcatggcccggtga
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