Pseudonocardia broussonetiae: HOP40_34275
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Entry
HOP40_34275 CDS
T07210
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pbro
Pseudonocardia broussonetiae
Pathway
pbro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HOP40_34275 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbro03400
]
HOP40_34275 (mutM)
Enzymes [BR:
pbro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HOP40_34275 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HOP40_34275 (mutM)
DNA repair and recombination proteins [BR:
pbro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HOP40_34275 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
HpcH_HpaI
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QJY50199
UniProt:
A0A6M6JUL9
LinkDB
All DBs
Position
complement(7089115..7090014)
Genome browser
AA seq
299 aa
AA seq
DB search
MPELPEVEVVRRGLADHVLRRTIASVDVAHPRAVRRHVAGGPDFAARLAGRTVTAARRRG
KYLWLDLDGDEGAGEQGGDALLAHLGMSGQMLVADESRPDEKHLRIRLRFDDDGPELRFV
DQRTFGGLSLHPVVGPDRLPEPVAHIARDPMDPAFDLDAAVAGIRRRRTGLKRALLDQTV
VSGIGNIYADEALWRARLHGERPTEKLTRAQGRTVLAAAAEVMDAALAAGGTSFDALYVN
VNGASGYFDRSLDAYGQADRPCRRCGTPIRRESFMNRSSFSCPRCQPRPRSGATAIRGA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctccccgaggtcgaggtcgtccggcgcggcctggccgaccacgtcctccgg
cgcaccatcgcctccgtcgacgtcgcccacccgcgcgcggtgcgccgccacgtcgccggc
ggccccgacttcgccgcccgcctcgccggccgcacggtcaccgcggcgcggcgccggggc
aagtacctgtggctcgacctcgacggcgacgagggtgcgggggagcagggcggcgacgcg
ctgctcgcccacctcggcatgagcggccagatgctcgtcgccgacgagagccgccccgac
gagaagcacctgcgcatccgcctgcggttcgacgacgacggcccggagctgcggttcgtc
gaccagcggacgttcggcgggctgtcgctgcaccccgtcgtcggcccggaccggctgccc
gagcccgtcgcgcacatcgcccgcgacccgatggaccccgcgttcgacctcgacgccgcc
gtggccggcatccgccgccggcgcaccggcctcaagcgcgcgctgctcgaccagaccgtc
gtgtccggcatcggcaacatctacgccgacgaggccctgtggcgcgcgcggctgcacggc
gagcgccccaccgagaagctgacgcgggcccaggggcggacggtgctcgccgcggccgcc
gaggtgatggacgccgcgctggccgcgggcggcacgtcgttcgacgcgctgtacgtgaac
gtcaacggcgcctcgggctacttcgaccgctcgctcgacgcctacgggcaggccgaccgc
ccgtgccggcgctgcggcaccccgatccgccgcgagtcgttcatgaaccgcagctcgttc
agctgcccgcgctgccagccccggccccggagcggcgctacagccatccgcggcgcttga
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