Paraburkholderia bryophila: NDK50_06115
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Entry
NDK50_06115 CDS
T08797
Name
(GenBank) efflux RND transporter permease subunit
Organism
pbry
Paraburkholderia bryophila
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WCM21034
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Position
1:complement(1384410..1387667)
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AA seq
1085 aa
AA seq
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MLKIVRLALTRPYTFIVLALLILMIGPLAALRTPTDIFPDIRIPVISVVWNYAGLQPDDM
SGRIVSYYERTLGTTVNDVAHIESQSFRGYGIVKIFFQPTVDIRTATAQVTSVSQTVLKQ
MPPGTTPPQILNYNASTVPVLQLALTSNTLDEQKLADYATNFIRPQLLSVPGVAIPTPYG
GKTREVQIDLDPQALQAKKLSANDVATALAQQNQIIPAGTEKIGRFEYNIKLNNSPLALD
ELNALPIKTVDGATIYIRDVAHVRDGYPPQSNVVRVDGHRAVLMSILKNGSASTLDIIAG
VKAQLPRIEATLPPGLKLVTMGDQSTFVKGAVSGVAREGVIAAALTSLMILLFLGSWRST
VIIAASIPLAVLAAIAGLAAMGETLNVMTLGGLALAVGILVDDATVTIENINWHLEQGKD
VRSAILDGAAQIVAPAFVSLLCICIVFVPMLLLNGIARFLFVPMAEAVIFAMIASFILSR
TFVPMMAQYLLRPHASGGHASGELAATMDPHGGHFHMPPTRNPLVRFQRGFEGRFERVRG
VYRIVLGLALTHRKRFVTGFLIVVGASFLLAPWLGRNFFPNIDSGEIAIHVRAPIGTRIE
DTAAQFDLIENAVRRAIPPDQLRSIVDNIGLPNSGIDLTYNNSGTTGPQDGDILVSLNED
HRPTADYVRTLRETLPRQFPGTTFAFLPADIVSQILNFGAPAPIDLQVAGPNQAANHRYA
NEVMRQMRMIPGIADTRIQQASTYPQFTVSVDRSRADQLGITEQDVTNSVVASLSGTSQV
SPTYWLNPKNGVSYPIVAQTPQYRMTSLSNLSNLPVTGKAGQAQILGGIATITRGVGDAV
VSHYNIEPLYDVFATTQGQDLGAVAAKIQNIVHATAKDVPKGSIVTLRGQVQTMNSAFLG
LSLGLLGAILLIFLLIVVNFHSWSDAFVIVTALPAALAGIVWMLFTTHTPLSVPALTGAI
LCMGVATANSILVVSFARERLAVTGNALVAAMEAGFTRFRPVLMTALAMIIGMAPMALGL
GDGGEQNAPLGRAVIGGLICATFATLLFVPVVFSLVHRRDAAGHGHSPASSHDHASSEPG
VHHVH
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatagtccggttggctttaacccggccctacacgttcatcgtgctggcgctg
ctgatcctgatgatcggcccgcttgccgcgttgcgcacgccgacggatatctttcccgac
atccgcattcccgtgatcagcgtggtgtggaactacgccggcctgcaaccggacgacatg
tccgggcgcattgtcagttactacgagcgcaccctcggcacgaccgtcaacgacgtcgcg
catatcgagtcgcaatcgtttcgcggctacggcatcgtgaagatcttcttccagccgacc
gtggatatccgcaccgccaccgcgcaggtcacctcggtgtcgcaaacggtgctcaagcag
atgccgcccggcaccacaccgccgcagattctcaactacaacgcctccacggtgccggtg
ctgcaactggcgctcaccagcaatacgctcgacgagcagaagctcgccgactacgcgacc
aacttcattcgtccgcaattgctgagtgtgccgggcgtggcgattccgacgccgtacggc
ggcaagacccgtgaagtacagatcgacctcgatccgcaggctttgcaggcgaaaaagctc
tcggccaacgacgtcgccacggcgctcgcgcagcagaaccagataattcccgccggcacc
gaaaagatcggccgcttcgaatacaacatcaagctgaacaacagtccgctcgcgctcgac
gagctgaacgcgctgccgatcaagaccgtggatggcgcaaccatctacattcgcgacgtg
gcgcacgtgcgcgacggttatccgccacagagcaacgtggtgcgcgtggacggtcatcgc
gcggtgctgatgagcattctgaagaacggctcggcgtcgacgctcgacatcatcgcaggc
gtcaaggcgcaactgccgcgtatcgaagccacgctgccgccgggcctgaagctcgtcacg
atgggcgatcaatccaccttcgtaaaaggcgccgtcagcggcgtggcgcgcgaaggcgtg
atagccgccgcgttgacgtcgctgatgattctgctgttcctcggtagctggcgctccacg
gtgattatcgcggcgtcgattccgctggcggtgctggccgcgattgccggcctcgcggcg
atgggcgaaacgctcaacgtgatgacactcggcggcctcgcgctggcggtcgggattctg
gtggacgacgccaccgtcacgatcgagaacatcaactggcacctggagcaaggcaaggac
gtgaggagcgcgattctggacggtgccgcgcagatcgtcgcgcccgcgttcgtctcgctg
ctgtgtatctgtatcgtgttcgtgccgatgctgctgctcaacggcattgcgcgtttcctg
ttcgtgccgatggccgaggccgtgatcttcgcgatgatcgcctcgttcattctgtcgcgc
acgttcgtgccgatgatggcgcaatacctgttgcgtccgcatgcatcgggcggccacgcc
tccggtgaactggccgccacgatggacccgcacggcggtcacttccacatgccgccgacg
cgcaatccgctggtgcgtttccagcgcggcttcgaaggtcggttcgagcgcgtacgcggc
gtctaccggatcgtgctgggtctcgcgctcacgcaccgcaagcgcttcgtgacggggttc
ctgatcgtggtgggtgcgtcgttcctgctcgcgccgtggctcggccgcaatttcttcccc
aatatcgactcgggcgaaatcgcgattcatgtgcgcgcaccgatcggcacccggatcgaa
gacacggcggcgcaattcgatctgatcgaaaacgcggtacgccgcgcgattccgccggat
cagctacgcagtatcgtcgacaacatcggcttgccgaacagcggcatcgacctgacctat
aacaacagcggcacgaccggaccgcaggacggcgacattctcgtttcgctgaacgaagac
caccggccgacagcggactacgtgcgcacgttgcgcgaaaccctgccgcgccagtttccg
gggacgacgttcgcgttcctgccggccgatatcgtcagtcagattctgaatttcggtgcg
cccgcaccgatcgatctgcaagtcgccgggccgaaccaggcggccaatcaccgctacgcc
aacgaggtcatgcgccagatgcggatgattcccggcattgccgatacgcgtattcagcaa
gcttccacgtatccgcaattcaccgtgtccgtggaccgctcgcgcgccgatcagctcggc
atcaccgaacaggacgtcaccaactccgtggtggcgagcctgtccggcaccagccaggtg
tcgccgacttactggctcaatccgaagaacggcgtgtcgtatccgatcgtggcgcaaacg
ccgcaataccggatgacgtcgctgtcgaatctcagcaatctgccggtcaccggcaaggcc
ggtcaggcgcagattctcggcggcattgcgacgatcacgcgcggcgtgggcgacgcggtc
gtgtcgcactacaacatcgagccgctctacgacgtgttcgcgacaacgcaaggtcaagac
ctcggcgcggttgccgcgaagatccagaacatcgtgcacgccaccgcgaaagacgtgccg
aagggctcgatcgtcacgctgcgcggccaggtgcagaccatgaacagcgcattcctcggt
ttgtcgctcggcctgctcggcgcgatcctgctgatctttctgttgatcgtcgtgaatttc
cattcgtggagcgacgcgttcgtgatcgtcaccgcgttgcccgccgcgctggccggcatc
gtctggatgctgttcaccacccacacgccgctctcggtgccggcgctgaccggcgcgatt
ctctgcatgggcgtggcgaccgccaacagcattctggtggtgagcttcgcgcgcgaacgg
ctcgcggtgaccggcaatgcactggtcgccgcgatggaagccggcttcacgcgctttcgg
ccggtgctgatgacggcgctcgccatgatcatcggcatggcgccgatggcgctcggcctc
ggcgacggcggcgaacagaacgcgccgctcggccgcgccgtgatcggcggtctgatctgc
gcgaccttcgccacgctgctgttcgtgcccgtcgtcttcagcctcgtgcatcggcgcgac
gccgccggccacggccactcgcccgcttcttctcacgaccacgcttcatccgaacccgga
gtccatcatgtccactga
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