KEGG   Paraburkholderia bryophila: NDK50_18395
Entry
NDK50_18395       CDS       T08797                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
pbry  Paraburkholderia bryophila
Brite
KEGG Orthology (KO) [BR:pbry00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbry02044]
    NDK50_18395 (tssF)
Secretion system [BR:pbry02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NDK50_18395 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WCM19369
LinkDB
Position
1:4088487..4090367
AA seq 626 aa
MDARLLDYYNRELAYLRELGAEFAEAFPNAASHLGMHGTRVQDPYVERLLEGFSFLTARI
QLKMDAEFPRFSQRLLEVVYPNYLAPLPSMAIVAVQPNLREGSLHDGYTLPAGTPLRAHL
SDGEQTACEFRTAHALTLWPLRMAEVRLRGAPTELPLARLNVQGEVRAALTIRFEVCGAD
NLSQMPLDALTFFLGGAENQALPLLELVLAHCVGVVCSDGAQTADRCSLLDDGAVHHEGF
DAAQALLPYGTRSFQGYRLLHEYFAFPARFLFFSIRHLRPALRQIGGTTFSLTLLLDKAA
PELERSVDIRSLALFCTPVINLFPKRTDRIAISLQRHEHHLVVDRTRPLDHEIHTVEKVT
GHPQSAGSHCEFRPLYGTISGDAPSGHGRYFSVRREPRIGNAARGQRRGNAPAAYSGSEV
FLSLVDQYDAPFSDDLSQLSVEALCTNRDLAPLIPLTGNSDFSLRISAPVSAVKVLHGPT
PPRPALADSSITWRLISHLGLNYLTLTDLDGGEGAHVLRELLELYAGAAQADVTPQIQGL
RSVQVQPVYRQLPQPGPLMFGRGVAVSLMLDELAFAGASPYLFGAVLEQFFARHVSLNSF
SELAVATLQRGEISRWAPRAGCRPIA
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggatgcacgcctgctcgactactacaaccgcgaactcgcctatctgcgagaactcggc
gccgagttcgccgaagcgtttccgaacgccgccagccatctcggcatgcacggcacgcgc
gtgcaggacccgtatgtcgagcggctactggaaggtttcagctttctgaccgcgcgtatt
cagttaaagatggacgccgaatttccgcgcttttcgcagcggctgctggaggtcgtctac
ccgaactatctggcgccgttgccgtccatggcgatcgtcgccgtgcagcccaatctgcgt
gaaggcagtctgcacgacggctacacgttgccggccggtacgccgctacgcgcacacctc
agcgacggcgagcagaccgcctgcgaatttcgcaccgctcatgcgctgaccctttggccg
ctacgcatggcggaggtccgtctgcgcggcgcgcctaccgagttaccgctggcacgactc
aacgttcaaggtgaggtacgcgccgcgttgaccatacggtttgaagtctgcggcgccgac
aatctgagccagatgccgctcgacgctttgacgtttttcctcggtggcgcggaaaaccag
gcgctgcccttgctggaactggtgctcgcacactgcgtcggcgtggtctgcagtgacggc
gcgcagaccgcagaccgttgctcgttgctcgacgacggagccgtccatcacgaaggattc
gacgcggctcaggcgttgctgccttacggcacgcgctcgttccagggctatcggctactg
cacgagtacttcgcgttcccggcacgcttcctgttctttagcatcaggcatctacgcccg
gcgttacgccagatcggcggcacgacgttttcgctgacccttctgctcgacaaggcggcg
cccgaactcgagcgctcggtcgacatccgtagtcttgcgctgttctgtacgccggtcatc
aatctgtttccgaaacgcacggaccgcatcgcgatctcccttcagcgtcacgaacatcat
ctggtggtggaccgtacgcgaccgctcgaccacgagatccataccgtcgagaaagtgacc
gggcacccgcagtcggccggcagtcactgcgagtttcggccgctctacggcacgatttca
ggcgacgcgccaagcggccacgggcgctatttttcggtccgtcgcgaacctcgtatcggc
aacgccgcgcgcgggcagcgacgcggcaatgcgccggccgcctatagcggcagcgaagtg
ttcctgtcgctggtcgaccagtacgacgcgccgttttcggacgatctaagtcagttgtcg
gtggaagccctctgcaccaatcgcgacctcgcgccgctgatcccgcttaccggcaacagc
gatttcagcttgcgtatttccgcccccgtcagtgccgtcaaggtgctgcacggacccacg
ccgccgcgcccggcgctggccgatagcagcatcacctggcggctgatcagccacctcggt
ctgaactatctgacgctaaccgatctcgacggcggcgaaggcgcacacgtgctgcgcgag
ttgctcgaactttatgcgggcgccgcgcaagccgacgtgacgccgcagatccaggggctg
cgcagcgttcaggttcaacccgtgtaccgtcagttgccgcagccgggcccgctgatgttc
ggccgcggcgtagccgtttcgctgatgctcgacgaactggcgttcgccggcgccagtccc
tatctgttcggcgcggtgctggagcaattcttcgcccgccatgtgtcgctgaacagcttt
agcgagctcgccgtggcaacgttgcagcgcggtgaaatcagccggtgggcgccgcgtgcc
ggctgccgtccaatcgcatga

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