Paraburkholderia bryophila: NDK50_18545
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Entry
NDK50_18545 CDS
T08797
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pbry
Paraburkholderia bryophila
Pathway
pbry00470
D-Amino acid metabolism
pbry00550
Peptidoglycan biosynthesis
pbry01100
Metabolic pathways
pbry01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pbry00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NDK50_18545
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NDK50_18545
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NDK50_18545
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbry01011
]
NDK50_18545
Enzymes [BR:
pbry01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NDK50_18545
Peptidoglycan biosynthesis and degradation proteins [BR:
pbry01011
]
Precursor biosynthesis
Amino acid ligase
NDK50_18545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATPgrasp_ST
ATP-grasp
TTL
ATPgrasp_YheCD
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
WCM19397
LinkDB
All DBs
Position
1:complement(4125269..4126210)
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AA seq
313 aa
AA seq
DB search
MSGIDPKKFGKVAVLLGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPSERPLGALKAE
GFDRAFIALHGGYGENGQIQGALDFYGIKYNGSGVLGSALGLDKFRTKLVWQQLGIPTPQ
FETVLRGDDYAARAQDIVAKLGLPLFVKPASEGSSVAVIKVKSADALPAALLEAIKYDRI
VVVEKSIEGGGEYTACIAGDLDLPLIRIVPAGEFYDYHAKYIANDTQYLIPCGLAPEEEA
RLKVLARRAFDVLGCTDWGRADFMMDAQGNAYFLEVNTAPGMTDHSLPPKAARAVGISYQ
DLVVGVLALTLQD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtatcgatccgaaaaaattcggcaaggtggcagtacttctcggcggtgaatcc
gccgagcgcgaagtgtcgctcacgtccggccgcctggtgctgcaaggactgcgcgacgcg
ggtatcgacgcgcatccgttcgacccgtccgagcgtccgctcggcgcgttgaaagcggaa
ggcttcgaccgcgcgttcatcgccttgcatggcggttacggcgagaacggccagattcag
ggcgcgctcgacttctacggcatcaagtacaacggcagcggcgtgctcggctcggcgctc
ggtctggacaagttccgcaccaagctcgtgtggcagcagctcggcattccgacgccgcag
ttcgaaaccgtgctgcgcggcgacgattacgcggcgcgcgcgcaggacatcgtcgcgaag
ctcggcttgccgctgttcgtgaagccggcaagcgaagggtcgagcgtcgcggtgatcaag
gtgaaaagcgcggacgcgctgcccgccgcgttactcgaagcgatcaagtacgacaggatt
gtcgtggtcgagaagagcattgaaggcggcggcgagtacaccgcgtgcattgccggcgat
ctcgatctgccgctgatccgcatcgtgccggccggcgagttctacgactaccacgcgaag
tacatcgcgaacgacacgcagtatctgattccgtgcggactcgcgcccgaagaagaagcg
cgcctgaaagtgctggcccgccgcgcgttcgacgtgctcggctgcaccgactggggccgc
gccgatttcatgatggacgcgcagggcaatgcgtattttctggaagtgaacacggcgcct
ggcatgaccgatcactcgctgccgccgaaagcggcgcgcgcggtgggcatcagctatcag
gatctggttgtcggcgtgttggcgctgacgctgcaggactaa
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