Pseudoalteromonas sp. Bsw20308: D172_012575
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Entry
D172_012575 CDS
T04175
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Pathway
pbw03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D172_012575 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbw03032
]
D172_012575 (rnhB)
Enzymes [BR:
pbw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
D172_012575 (rnhB)
DNA replication proteins [BR:
pbw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
D172_012575 (rnhB)
Elongation factors (archaeal)
D172_012575 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
ALQ08805
LinkDB
All DBs
Position
complement(2864036..2864638)
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AA seq
200 aa
AA seq
DB search
MQIDRPNVTLIAGVDEVGRGPLVGDVVTAAVILDPTKPIAGLADSKKLTDKKRQALAIEI
KEKALCYAYGRCSPTEIDELNILHATMLAMTRAVEALSTQPEFVFIDGNRLPKLTMPAQA
VVKGDSLVAEISAASILAKVARDDEMLELDKRHPEYGFAGHKGYPTKAHFAALEQYGAID
EHRKSFKPVQRVLAQANGEG
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattgatagaccaaatgtaaccctaattgccggtgtagatgaagttgggcgcggc
ccgcttgttggtgatgtagttactgccgccgttattttagatcccactaaacctattgct
ggcttagcggattctaaaaaattaacggataaaaaacgccaagcactggcaattgaaatt
aaagaaaaagcattgtgttacgcgtatggtcgctgcagtccaacagaaattgatgaatta
aatattttacacgcgactatgcttgccatgactcgcgcagtggaggcattaagtacgcaa
cctgaatttgtatttatagatggtaatcgcttgccaaaactcactatgccagcgcaagct
gttgttaaaggcgatagcctagtggcagaaatttcagccgcgtctattttagctaaagta
gcgcgcgatgacgaaatgcttgagcttgataaacgccaccctgaatatggttttgcaggg
cataaggggtatccaactaaagcgcattttgcagcgcttgagcagtacggcgcgattgac
gagcatcgtaaaagctttaaacctgtgcagcgtgtattggcgcaagccaatggtgagggc
taa
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