Pseudomonas cannabina pv. alisalensis: JGS08_19725
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Entry
JGS08_19725 CDS
T07379
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Pectate_lyase_3
He_PIG
Beta_helix
Peptidase_M10_C
NosD
End_N_terminal
Motif
Other DBs
NCBI-ProteinID:
QQN20816
LinkDB
All DBs
Position
4411601..4416433
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AA seq
1610 aa
AA seq
DB search
MIFNTKDFGALGDGITDDTAAIQATIDAAAAAGGGEVVLGAGTYIVSGGEEPSDGCLMLK
SNVTLSGAGMGETIIKLADGSDTKVTGIVRSAYGEETHDFGMKNLTLDGNRDATTGKVDG
WFNGYIPGSDGKDSNVTLDSVEIKDCSGYGFDPHEQTVNMVIKNSVSHGNGLDGFVADYL
SDSVFENNVAYDNDRHGFNVVTSTHDFTLSNNVAYGNGSTGIVVQRGSENIPSPANITIT
GGAVYGNGAEGVLIKLSSQVSVSGVDIHDNGSAGVRIYGSTGVDVFDNTLSNNSLGAPVP
EIIIQSYDDTSGVSGKFFSGSDNLIRGNVITGSDNSTYGVAERNEDGTDRNSIVGNTISH
TSKGLTLVYGDGSFAGDAFPLVTVQGSEANDIITGSAANELIFGLAGKDTLNGGAGDDIL
VGGAGADKLSGGAGADTFRFDQLTDSYRTATVSATDLVSDFDISQDRIDLSNLGFTGLGS
GKAGTLNISYNATLDRTYIKSLDADSDGNRFELGLSGNLKDTLNASHFMFQRVIEGTAGG
DTLTGTEGNDLINGNAGVDRLNGGAGADTLTGGADADILTGGAGADLFIYTSRLDSYRNY
NASGTKQSDTITDFNTAEDRIDLSSIGLRGLGDGSANTIYLSVNADGSKTYVKTNAVDTT
GNRFEIALEGNLLDKLSASNFIFSTASATNQAPVLNTPLIDQNVTELKAFSYAVQPGSFS
DPDSTALTYSATLTDNSALPDWLTFDSKTLTFSGTPGGTASGLYSILLTASDATGASVAD
SFAINVGNVAPGTLTGSQNAETLYGTEGDDTLLGLGGDDTLRGDTGADILNGGAGRDTLY
GGANADTFVYSTLTDSYRNYEAGGLTATDTIADFTSGQDKIDVSALGVLGLGNGENHTLY
MTLNEAGDKTYVKSATPDADGNRFEIALSGNLIDTLTEADFVFGQRESQEILYLPTLGQS
NARLLRMTEDDNQSGTSEMVKDLIRYTDYDVRSQFNDANGDPIDLAVGGSTVVGYSTGTQ
EEQRVSWWLTDTDQPGPALLRATELLKAQLATLSTLDQVTTGIVWSQGEEGAQEIARATD
KQAAADLYKASTLKVFDYLHAQIGDFTVYMAETGHYQTDAAKARGYTEEKISAIVEGVGY
VRNAQEAIAHERTDVKLAVDYNDLPLRYEVNPLVYPDDVWHLHEESAEIVGQRLADFIAN
DLGFSGNSGDNNNPADIVSGGQNEGGNIFGTSDDDTLVGGTGNDILDGDQGADDMTGGDG
NDIYVVDNALDTVTESNDSPSQIDTVVSSVSWELGANVENLMLTGFSAINATGNALKNVI
TGNAANNILDGGAGADLLTGGDGSDSYVVDDVADRVVETATDAQTGGIDTVYSSLASYTL
GANLENLVITSSAAANATGNALDNVLYAGAGDNVLDGRDGNDTVSYLFATAGVTVALNTS
AQQATGGSGLDTLKGTENLTGSQFADALTGNKNANVLIGGEGNDTLSGGAGDDVLIGGSG
ADTLIGGTGADHYVFNSANDLGLGALRDIINGFKVAEGDKLDFSAFDARPSTDDADAFVF
IGNAAFSAGNTGELRFADGVLYGNIDDNVGADFEIQLTGVQSLQTADVIV
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atgatattcaacacaaaagacttcggagcgctgggcgacggtatcaccgacgatacggcc
gccatacaggccacgatcgatgcggcggcggcagcagggggcggcgaagtcgttctgggg
gctggtacttacatcgtgtccggcggcgaagagccgtccgacggctgcctgatgctcaag
agcaacgtcaccctgtcgggcgcagggatgggtgaaacgatcatcaagctggccgacggc
tcggacaccaaggtgaccggcatcgtgcgctcggcctacggcgaagaaacgcatgacttc
ggcatgaagaatctgaccctggacggcaaccgggacgctaccaccggcaaagtggacggc
tggttcaacggctatattccgggctctgacggcaaggactcgaacgtcactctcgacagt
gtcgaaatcaaggactgctcgggctacggcttcgacccgcacgagcagaccgtcaacatg
gtgatcaagaacagcgtgtcgcatggcaacggcctggacggcttcgtggccgactacctg
agcgacagcgtgttcgaaaacaacgtggcgtatgacaacgatcgccacggtttcaacgtg
gtcaccagcacccacgacttcaccctgagcaacaacgtcgcctacggcaatggcagcacc
ggcattgtggtgcagcgcggcagcgagaatattccgtcgccggccaacatcaccatcacc
ggcggcgcggtgtacggcaacggtgccgagggcgtgctgatcaagctgtccagccaggtg
tcggtcagcggcgtggacatccatgacaacggcagcgcaggcgtgcgcatttacggcagc
accggggtggatgttttcgacaacacgctgagcaacaactccctcggtgctccggtgcca
gaaatcatcatccagtcctacgatgacacttcgggcgtttccggcaagttcttcagcggc
agcgacaacctgatccgcggcaacgtaatcaccggcagcgacaactccacttatggcgtt
gccgagcgtaacgaagacggtaccgaccgcaacagtatcgtgggcaataccatcagccac
accagcaagggcctgaccctggtctacggcgacggcagctttgccggcgacgcgttcccg
ctggtcaccgtgcaaggcagcgaagccaacgacatcatcacgggcagcgcggccaacgag
ctgatcttcggccttgcgggcaaggacaccctgaacggcggcgcgggcgacgacattctg
gtcggcggagcgggtgccgacaagctcagcggtggcgcgggtgccgacaccttccgcttc
gatcagttgaccgacagctatcgcaccgccactgtcagcgcgaccgacctggtgtccgat
ttcgacatcagccaggaccgcatcgacctttcgaacctcggcttcaccgggctgggcagc
ggcaaggccggaacgctgaacatcagctacaacgcgaccctcgaccgtacctacatcaag
tcgctcgacgcggatagcgacggcaaccgcttcgagctggggctgagcggcaacctgaaa
gacacgctgaatgccagccacttcatgttccagcgtgttattgaaggcaccgcaggcggc
gataccctgaccggcaccgagggcaacgacctcatcaacggcaatgctggcgtggaccgt
ctaaacggcggcgcgggtgcggacaccctgaccggcggtgccgatgccgatatcctgacc
ggcggcgccggggcggatcttttcatctacacctcgcggctggacagctatcgcaactac
aacgccagcggtaccaagcaaagcgacaccatcactgatttcaacacggctgaagaccgc
atcgacctgtccagcatcggtctgcgcgggctgggcgatggcagcgccaataccatttac
ctgtcggtgaatgccgatggcagcaagacctacgtcaagaccaacgccgtcgacaccacc
ggcaaccgcttcgaaatcgcactggaaggcaacctgctcgacaaactgagcgcgtccaac
ttcattttttccaccgcgtcggccaccaaccaggctccggtgctcaatacgccgctgatc
gatcagaacgtgaccgaactcaaagcgttttcctacgccgtgcagcccggcagcttcagc
gacccggacagcaccgcgctgacttacagcgccaccctgaccgacaacagcgccctgccc
gactggctgacattcgacagcaagaccctgactttcagcggtacgcctggcggcacggca
tccgggttgtactcgatactgctgacggccagcgacgccaccggcgcttcggtggctgac
agcttcgccatcaacgtgggcaacgtcgcgccaggcacgctgaccggctctcaaaacgcc
gaaacgctgtacggcaccgagggggacgacacgcttctgggcctgggcggcgacgacacg
ctgcgtggcgataccggcgccgacatcctcaacggcggcgcaggccgggacaccttgtac
ggcggagcgaatgccgacaccttcgtttacagcacgctcaccgacagctaccgcaattat
gaagcgggcggtctgacagccaccgacacgatcgctgatttcacctccggccaggacaag
atcgacgtctctgcgctgggcgtcctggggctgggcaacggcgaaaaccacacgctgtac
atgaccctcaacgaagcgggcgacaagacttacgtcaagtcggcaacgcccgacgccgat
ggcaatcgcttcgaaattgccttgagcggcaacctgatcgataccctgaccgaagccgat
ttcgtgttcggccagcgtgaatcccaggaaatcctttacctgccgacgctgggccaatcc
aacgcgcgactgctgcgcatgaccgaagacgataaccagtccggcacctcagagatggtc
aaggacctgatccgttacaccgattacgacgtgcgcagccagttcaacgatgccaatggc
gaccccattgacctcgccgtgggcggcagcaccgtggttggctactcgaccggcacgcag
gaagaacagcgtgtttcctggtggctaaccgacaccgatcagccgggaccggcactgctg
cgcgccaccgaattgctcaaggcgcaactggcgacgctgagtacgctcgatcaagtcacc
accggcattgtctggagccagggcgaagaaggcgctcaggagatagcccgcgccaccgat
aaacaggcggcagccgatttgtacaaggcgtcgaccctcaaagtgttcgactacctgcac
gcgcagatcggtgacttcacggtgtacatggccgaaaccggtcactaccagacggacgca
gccaaggctcgcggttacaccgaggaaaaaatcagcgcaatcgtcgaaggcgtgggatat
gtgcgcaatgcgcaggaagccatcgcccatgagcgcaccgacgtcaagctggcggtggat
tacaacgatttgccgttacgctatgaggtcaacccgctggtgtaccccgatgacgtctgg
cacctgcacgaagagtccgccgaaatagtcggtcagcgactggccgatttcatcgccaac
gacctgggcttcagcggcaattctggcgacaacaacaatccggccgacattgtcagcggc
ggtcagaacgaaggtggcaacatcttcggcaccagcgacgacgacacactggttggcggc
accggcaacgacattctggacggagatcaaggcgcggacgacatgacaggcggcgacggc
aatgacatttatgtcgtcgacaacgctctggacaccgtcaccgaaagcaacgactcgccg
tcgcagatcgataccgtggtgtcttccgtcagctgggagctgggggcgaatgtggaaaac
ctgatgcttaccgggttttctgccatcaatgccacgggtaacgcgctgaaaaacgtcatc
accggtaatgcggccaacaatattcttgacggcggcgcgggcgctgacctgctcacgggc
ggggacggctcggatagctacgtcgtcgatgacgttgctgaccgggtggtcgaaaccgcg
actgatgcccagaccggcggcatcgatacggtttacagctcgctggcgagttacaccctc
ggggccaatctggaaaatctggtgatcaccagcagcgccgccgccaatgccaccggtaac
gcgctggacaacgtgctgtatgcaggcgctggcgataacgtgctcgacggccgcgatggc
aatgacacggtgtcttacctgttcgccaccgctggcgtcacggtcgcgctgaacaccagc
gctcaacaagccactggcggctccgggctggacaccctcaagggcacggaaaacctgacg
ggcagccagttcgccgacgcgctgaccggcaacaagaacgccaacgttttgatcggcggc
gaaggcaatgacacgttatccggcggcgcgggcgacgatgtgctgatcggcggttcaggc
gcggacacgctgattggcggcaccggtgccgatcattatgtgttcaacagtgccaacgac
cttggtttgggcgcactgcgcgacatcattaacggcttcaaggtggcggaaggcgacaaa
ctggacttctctgccttcgatgcccggccgtccaccgatgacgcggatgctttcgtgttc
atcggcaatgctgcgttcagcgccggtaacacaggcgagctgcgcttcgccgatggcgtg
ctgtacggcaacatcgacgacaacgtcggcgcggatttcgaaatccagctgaccggcgtg
cagagcctgcagacggctgacgttatcgtctga
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