KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_25915
Entry
JGS08_25915       CDS       T07379                                 
Name
(GenBank) DotU family type VI secretion system protein
  KO
K11892  type VI secretion system protein ImpK
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Pathway
pcab03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JGS08_25915
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcab02044]
    JGS08_25915
Secretion system [BR:pcab02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JGS08_25915
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: QQN21940
LinkDB
Position
complement(5801768..5803081)
AA seq 437 aa
MHSNDDGSSLPASDRTQFMPRPGGRSGPSGAPEPAPPLNVPAAPLATGQAQGLNPLESAA
GPLLALLARLRSTIAHPAPASLRAQLLAWLRQFEERAEAAGVARNDVLLGRYVLCTALDE
AVMSTPWGSTSEWGKQSLLITVHNEAWGGEKVFQLLDHCLQSPRERLYLLELLYLCMCLG
FEGRYRVMNNGRSELEALRERTSAAIRSARGEHERELSPHWRGLTLARDRLIQFMPPWVG
VAIGLALLLLLLLVLRLKLASDAEPVFKNIHALGEIPVQSIDRPVAQPKLIERPRLAGFL
ADDIKAGKVAVEDAVDRSVVTIRGDELFASGSATIVDDFQPLMLRIADAIRKVKGDVRIT
GHSDNRPIATLRFPSNWALSQARAEQVLRILAAKTGQPQRFTAEGRSDTEPLGSNATAEG
RAKNRRVEITVLAEGVE
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgcattccaacgacgacggttcatccctgcccgccagcgaccgcacccagttcatgccg
cgtccgggcggtcgcagcgggcccagtggcgctccggagcccgctccgccgctcaatgtg
ccagcggcgccgctggcaaccggtcaggcgcaggggctcaatccgctggaaagtgccgca
ggtccgctgctggccttgctggcccgtctgcgcagcaccatcgcccacccggcaccggcc
agcctgcgggcgcaattgctggcctggctgcgccagttcgaggagcgcgccgaagcggcc
ggggtcgctcgcaacgatgtgctgctggggcgctacgtactttgcaccgcgcttgatgaa
gcggtcatgagtacaccgtggggcagcaccagcgaatggggcaaacaaagcctgctgatc
acggtgcacaatgaagcctggggaggtgaaaaggttttccagttgctcgaccactgcctg
caaagcccgcgcgagcggttgtacctgctggagcttttgtacctgtgcatgtgcctgggc
ttcgagggccgctatcgggtgatgaacaacggtcgcagcgaacttgaagcccttcgcgag
cggaccagtgcagcgatccgcagcgcccgcggcgagcatgaacgtgagctctcgccacac
tggcgcggcctgaccctcgcccgtgatcgcttgatccagttcatgccgccgtgggtcggt
gtcgccatcgggctggcactgttgctgctgttgctgttggtgctgagactgaaactggcg
tctgacgccgagccggtattcaagaatattcatgcgctgggcgagattccggtgcagtcc
atcgaccgtcccgtggcgcagccgaaactgatcgaacgcccgcgtcttgcaggctttctg
gccgacgacatcaaggccggcaaggtggcggttgaagacgccgtggatcgctcggtggtg
actattcgcggtgacgagctttttgcgtcgggcagcgccaccatcgtggacgacttccag
ccactgatgctgcgcattgccgatgccatccgcaaggtcaagggtgacgtgcgtatcacc
gggcacagcgacaaccgtcccatcgcgaccctgcgctttccgtccaactgggcgctgtcg
caggcgcgtgccgagcaagtgttgcgaatcctcgccgccaagactggccagccgcagcgt
ttcaccgctgaagggcgcagcgataccgagccgctgggttccaacgcgaccgctgaaggc
cgagcgaagaatcgccgggttgaaatcactgtattggcggagggggtcgagtga

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