KEGG   Pseudomonas cannabina pv. alisalensis: JGS08_25970
Entry
JGS08_25970       CDS       T07379                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
pcab  Pseudomonas cannabina pv. alisalensis
Brite
KEGG Orthology (KO) [BR:pcab00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcab02044]
    JGS08_25970 (tssF)
Secretion system [BR:pcab02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JGS08_25970 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: QQN21948
LinkDB
Position
5812025..5813884
AA seq 619 aa
MNPRLLGLYNQELQHIRESAAEFAREYPKIAGRLTLSGLDCADPYVERLLEGFAYLTARV
QLKLDAEYPTFTHNLLEIAYPHYLAPTPSMTVVQLQTDPNEGSLSSGFTLPRDSVMRAAL
GRDSQTPCEYRSAHDVTLWPLQVTQAEYFGNPAAVLGRLAASEPKAKAGLRITLRTGAEL
TFDKLALDNLPLFLHGADEQPFRLYEQLLGNACAVFARQPGGDWVERLSADALRPCGFDD
REAALPVVPQAFQGYRLLQEYFALPQRFLFVDFSQLTRAVQRCSGQELELIVLFNSFEQS
LESSIGAEQFVPFCTPAINLFPRRLDRIHLTDRVHEHHAIADRTRPMDFEIHSLKSVTGH
GTGPDQPFLPFYAVRDPSRYGRDKAYYVLRREPRVLSSEQRRNGTRSNYVGSETFISLVD
SQQAPYGHDLRQLGLTALCTNRDLPLFMSVGSGKTDFTLADSAPVSAVRCLAGPSRPRAS
HAHDNKAWRLISQLSLNYLSLSEQGQGAAALRELLRLYGDDNDVALQLQIEGLREVSSKP
CTRRLPMPGPIVFGRGLEITLEFDENAFRGTGVFLLGTVFERFLARYVSINSFTETVLRT
TERGEIMRWKARPGRRPTL
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgaatccgcgcctgttggggctgtacaaccaggaattgcagcacatccgcgaaagcgcc
gccgagttcgccagggaatacccgaagatcgccgggcgtctgaccttgtcgggcctcgat
tgcgcagacccgtatgtcgagcgcctgctggaagggttcgcttacctgaccgctcgcgta
caactcaaactggacgccgaatacccgaccttcacccataatctgctggaaatcgcctat
ccgcactacctggcgcccaccccctcgatgaccgtcgtgcagctgcagacggacccgaac
gagggttcgttgagcagcggctttaccctgccccgcgacagcgtgatgcgtgccgcactg
ggtcgcgactcgcaaacaccctgtgagtatcgaagcgcgcatgacgtgacgttgtggcct
ttgcaggtgacccaggcggagtatttcggcaatccggcagccgtgctcggacgcctggcc
gccagcgaacccaaagccaaggcggggctgcgcattaccttgcgcacgggtgcagagctg
acctttgacaagctggcgctggataacctgccgttgtttctgcatggcgcagacgaacaa
ccctttcgcctttatgagcaactgctcggcaacgcctgtgccgtgtttgcccgccagccc
ggcggcgactgggtggagcgcctgtctgccgacgccttgcgcccctgcgggttcgatgac
cgtgaagcggcattgcccgtggtaccccaagcctttcagggctaccgcctgttgcaggaa
tattttgctctgccgcaacgctttctgtttgtcgatttcagccaactgacccgtgccgtg
cagcgttgctccgggcaggagctggagctgatcgtgctgttcaacagtttcgagcaaagc
ctggaaagcagcatcggcgccgagcaattcgtaccgttctgcacacccgccatcaacctg
ttcccgcgccgtcttgaccgcattcacctgaccgatcgcgtccatgagcaccatgcaatt
gccgaccgtacgcgaccgatggatttcgagattcattcgctcaagagcgtgaccgggcac
ggcaccgggccagatcagccattcctgccgttttatgcggtgcgcgacccgtcgcgttac
ggccgtgacaaggcgtattacgtgctgcgccgggagccgcgggtgttgtccagcgagcag
cgacgcaatggaacacgctcgaactatgtgggcagcgagacgttcatcagcctggtcgac
agccagcaggcaccttacggacatgatttgcgccaattgggcctgactgcattgtgcacc
aatcgtgatctgcccctgttcatgagcgtcggcagcggcaagaccgacttcacactggcc
gacagcgcgccggtgtccgccgtgcgctgcctggccggcccgagccgcccgcgcgccagc
catgcccacgacaacaaggcctggcgcctgatcagccagctgtcgctgaattacctgtca
ttgagcgaacagggtcagggcgcagcggcattgcgcgaactgctccggttatacggcgac
gacaacgacgttgccctgcaattgcagatcgaaggcctgcgcgaggtcagcagcaaaccc
tgcacccgccgcctgccgatgccgggcccgatcgtatttggccggggtctggaaattacc
ctggagtttgacgagaacgcctttcgcggcaccggagtgtttttgctcggcacggtgttc
gagcgtttcctggcacgttacgtgtcgatcaacagctttaccgagacggtgttacgtacc
accgaacgcggcgagatcatgcgatggaaagcccgacccggacgccgtccgaccctttga

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