Pseudomonas cannabina pv. alisalensis: JGS08_26015
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Entry
JGS08_26015 CDS
T07379
Name
(GenBank) FIST C-terminal domain-containing protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
FIST
FIST_C
DUF948
DUF16
BORCS6
SlyX
Laminin_II
Phage_GPO
Fez1
Motif
Other DBs
NCBI-ProteinID:
QQN21956
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Position
5827013..5829031
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AA seq
672 aa
AA seq
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MSFLSRFRASTSRTGGVLSVITSARELNKTLSTLSFDPVYLTGFVSPHVDFDQVARSVAA
RFPTAKISLCTTSGELCSSNDSLYCAADNQWDRIVLALFDASVIQSAEIVHIPLHSEDIR
GTGKRLSMRERIARLTDSIKRTQVSTPIDHRDTLAYVTFDGLSASESFFMEALYESGRFP
CLFVGGSAGGKGDFKKTLIHDGKRSYENHAQVVFLKSAKNVRFGVFKSQNFEATPLSLSV
LTASLEERYISQVVNARGEIATMVSALCDALKCERHELEGKLAHYSFAIRVGEELFVRSI
ARIDYESERVHLFCDVAPGEELVMVKRTSMIDTTRNDFARFLQGKSGKPLLGLLSDCILR
RLNNGSELGRMNGVFGETPVVGFSTFGEILGLNLNQTLTAVFFFKVPEGQPFRDDYIDNF
IAYYGEFKAFFLRRQIKKLAGLSHVVVKQINQFKQRNFVQSIDPTGLDEQIRPVFSGLSD
LGDVLVKAHHDQEEIAGQLRHYSGELHVSMDELSQTITQQETVIDKASNTVKSLVSQADE
VVLGSRELAKSSLRIQSVVQTIQQIAGQTNLLALNAAIEAARAGEMGRGFAVVADEVRQL
AQKTSQNANDIGSDIERLAEEIRKVAQHIEEQSLEVGTLTGLLSELEGSSGMTAGTSQRT
RQLADTLVGLTK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctatctcgcttccgggccagcacgtcgcggaccggaggcgtactcagtgtc
attacgtcagcccgtgaattgaataaaacactgtcgacgctgagttttgacccggtttac
ctgaccggtttcgtttcgccgcatgttgatttcgatcaggttgcgcgctcggtcgcagca
cgctttcccactgcgaaaatcagcctgtgcacgacgtcgggcgaactctgctccagcaat
gattcgctgtattgcgccgccgataatcagtgggaccgcattgtgctggcactgtttgac
gccagtgtgatccagagcgcggagatagtgcatattccgctgcacagcgaagacattcgt
ggcacgggcaagcgtctgtcgatgcgtgagcggattgcgcggttgaccgactcgatcaag
cgcacgcaggtcagcacgcctatcgaccatcgggatacgctggcctacgtcacgttcgac
ggtttgtccgcgtccgagtcgttcttcatggaagcgctgtatgaatcaggccgcttcccc
tgcctgttcgtaggcggctcggccggcggcaagggcgacttcaagaagaccttgatccat
gacggcaaacgcagctacgaaaaccatgcgcaagtggtgtttctcaagagcgcgaagaac
gtgcgtttcggcgtgttcaaaagccagaacttcgaggctacgccactgagcctgagtgtc
ctgacagcgtcgctggaagagcgttacatcagtcaggtggtcaacgcccgaggcgagatc
gccaccatggtgtcggcgctgtgtgacgcgctgaagtgcgagcgacacgagctggaaggc
aagctggcgcattattcgttcgccatccgggtgggcgaagagctattcgtacgttctatt
gcgcgtattgattacgaaagcgagcgcgtccatctgttttgcgacgtcgcgccgggcgaa
gagctggtcatggtcaagcggacgtcgatgatcgacaccacgcgcaacgacttcgcgcgc
ttccttcagggcaaatccggcaagccgttgctcggtctgttgagcgactgcattctgcgc
cgtctgaataacggcagcgaactggggcgcatgaatggcgtgttcggcgaaacaccggta
gtgggcttttcgacgttcggggagatcctcggcctgaacctcaatcagaccctcaccgcc
gtatttttcttcaaagtgccggaaggccagccgttccgcgatgattacatcgacaacttc
attgcctactacggcgagttcaaggcgttctttctgcggcgccagatcaagaagctggcc
ggcctgagccatgtggtggtcaaacagatcaaccagttcaagcagcgcaatttcgtccag
tccattgatccgaccgggctcgatgaacagattcgtccggtgttcagcgggctgagtgat
ctgggtgacgtgctggtcaaggctcatcacgatcaggaagaaattgccggtcaattgcgc
cactactccggcgaattgcatgtgtcgatggatgagttatcgcagaccatcacgcagcag
gaaacggtcatcgacaaggcaagcaacaccgtcaaaagcctggtcagccaggcggacgag
gtggtacttggctcgcgggagctggccaagtccagcctgcgcattcaatcggtggtgcaa
acgatccagcagattgccgggcaaaccaatctgctcgcgctgaacgccgccatcgaggct
gcacgggccggtgaaatgggtcggggctttgccgtggtagccgatgaagtgcgccagctg
gcgcagaaaacctcgcagaacgcgaacgacatcggtagcgatatcgagcgtcttgccgaa
gagattcgcaaggtggcgcagcacatcgaggagcagtccctggaagtcggaacgctcacc
ggcttgctgtccgagctggaaggatcgagtggcatgacagcaggcacctcgcaacgtacc
cggcagctggcggatacgctggtagggctgacgaagtaa
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