Physeter catodon (sperm whale): 102975362
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Entry
102975362 CDS
T06011
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102975362 (RTF1)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102975362 (RTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
102975362
NCBI-ProteinID:
XP_007111772
Ensembl:
ENSPCTG00005018941
UniProt:
A0A2Y9EYS4
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All DBs
Position
11:complement(97064467..97114438)
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AA seq
710 aa
AA seq
DB search
MRVRLCVGRAAAAAAAVAVPLAGGQEGSPGGVRRGSRGTTMVKKRKGRVVIDSDTEDSGS
DENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSNSDDEWTFGSNKNKKKGKARKI
EKKGTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDEEFHD
GYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKKRFEIRKKLKTAKKKEKKEKK
KKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNRTAELL
AKKQPLKTSEVYSDDEEEEEDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSLPEELN
RVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKVYQLGGT
RTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKKELSIK
EALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQIQDQLN
ELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHNMKNQQMDPFTRRQCK
PTIVSNSRDPAVQAAILAQLNAKYGSGVLPDAPKEMSKGQGKDKDLNSKSASDLSEDLFK
VHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNLEDYKKRRGLI
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttcgcctttgtgtgggtcgagcagcggcggcggcggcggcagtggcggtccca
ctggcaggcgggcaagaggggagtccgggcggcgtccggcgtgggagccgggggaccacg
atggtaaagaagcggaaaggccgcgttgtgatcgactcagacacggaagacagtggcagc
gacgagaacctggatcaggagctcttgtccctggcaaagcggaaacgaagtgactctgaa
gagaaggagccgcctgttagtcagcctgcagcctcctcagactcggagacgtctaacagt
gatgatgagtggacttttgggagcaataaaaataagaagaaaggaaaagccagaaaaata
gagaagaaaggaaccatgaagaaacaggccaataaaactgcttcctcaggcagttcggac
aaagacagttcagctgagagctcagcccctgaggaaggtgaagtgtcagattctgacagc
aacagctcctcctccagttcagattcagactcttcctcagaagatgaggaattccatgat
ggctatggagaagacctcatgggagatgaggaagacagggcccgtctggaacagatgaca
gaaaaggagagagagcaagaactgttcaaccgcatagagaagagggaggtgttaaaaaaa
agatttgaaatcaggaaaaaactgaaaacagccaaaaagaaagagaagaaagaaaaaaag
aaaaagcaagaagaggagcaggaaaagaagaaactgactcagattcaagaatctcaggta
acatcccataacaaggaacgacgttccaaacgggatgagaaactagataagaaatctcaa
gccatggaggagctaaaagcagagcgagaaaaacggaagaacagaacagctgagctcctc
gccaagaaacagccattaaaaaccagtgaggtgtactctgacgatgaggaggaggaggaa
gatgacaagtccagtgaaaagtcagaccgctcatctcgaacatcgtcatctgatgaagaa
gaggagaaagaagagatccctccaaaatcacaaccggtctccttaccggaggaactgaat
cgggttcgattatcacggcataagctggaacgttggtgtcacatgcccttctttgctaaa
actgtcacaggatgttttgtacggattggcattggaaaccacaacagcaaaccagtttac
cgggttgctgagatcacgggtgtagtggaaaccgccaaagtttaccagcttggtggcacc
agaaccaacaaagggctacaactacggcatggcagtgaccagcgagtgttccgcctagag
tttgtctcaaaccaagagttcactgaaagcgaattcatgaagtggaaagaagcgatgttc
tctgctggcatgcagttgcccactctagatgaaatcaataagaaggaattatctattaaa
gaagctcttaattataaattcaatgaccaggacattgaagagattgtaaaagagaaagaa
agattcaggaaagctccacccaactatgctatgaagaaaacgcagctcctaaaggaaaag
gccatggccgaggacctgggggatcaggacaaggccaaacaaatccaagaccagctgaac
gagctggaggaacgagcagaggccctggaccgccagcggaccaagaacatatctgctatc
agttacatcaaccagcggaaccgggagtggaacattgtggagtctgagaaggcccttgtg
gctgaaagtcacaacatgaaaaaccaacagatggatccttttaccaggcgacagtgtaaa
cctaccatcgtttctaattccagagacccggctgttcaagctgccatattggcccagctg
aacgcaaaatacggttctggagtgttaccagatgctccaaaggaaatgagcaagggtcag
ggaaaggataaagatttgaattctaagtcagccagtgacctctcagaagacttgttcaaa
gtacatgatttcgatgtgaagattgatttacaagttcccagctcagagtcaaaggctttg
gccatcacctccaaggctccgccagccaaggatggagctccaaggagatctctgaacttg
gaagactacaaaaaacgacgagggcttatttga
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