Physeter catodon (sperm whale): 102978110
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Entry
102978110 CDS
T06011
Symbol
LRRC41
Name
(RefSeq) leucine-rich repeat-containing protein 41
KO
K10347
leucine-rich repeat-containing protein 41
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcad04121
]
102978110 (LRRC41)
Ubiquitin system [BR:
pcad04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul5 complex
Target recognizing subunit
102978110 (LRRC41)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
Motif
Other DBs
NCBI-GeneID:
102978110
NCBI-ProteinID:
XP_023975362
Ensembl:
ENSPCTG00005017698
UniProt:
A0A2Y9SDD0
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Position
4:145808995..145827575
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AA seq
815 aa
AA seq
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MAAPEAWRARSCWFCEVAAATTMEATSREAAPAKSSASGPSAPPALFELCGRAVSAHMGV
LESGVWALPGPILQSILPLLNIYYLERIEETALKKGLSTQAIWRRLWDELMKTRPSSLES
VTCWRAKFMEAFFSHVLRGTIDVSSDRRLCDQRFSPLLHSSRHVRQLTICNMLQGATELV
AEPNRRVLETLASSLHTLKFRHLLFSDVAAQQSLRQLLHQLIHHGAVSQVSLYSWPVPES
ALFILILTMSAGFWQPGPGGPPCRLCGEASRGRAPSRDEGSLLLGSRRPRRDAAERCAAA
LMASRRKSEAKQTARAAPAARVTRRSTQESLTAGGTDPKREPLPPATSHEAPGTKRPPST
PATTSSASASSSSTSSSKRAPASSAPQPKPLKRFKRAAGKKGARTRQGSGAESEDLYDFV
FIVAGEKEDGEEMEIGEVACGALDGSDPSCLGLPALEASQRFRSISTLELFTVPLSTEAA
LTLCHLLSSWVSLESLTLSYNGLGSNIFRLLDSLRALSSQAGCRLRALHLSDLFSPLPIL
ELTRAIVRALPLLRVLSIRVDHPSQRDNPAVPGNAGPPSHIIGDEEIPENCLEQLEMGFP
RGAQPAPLLCSVLKASGSLQQLSLDSATFASPQDFGLVLQTLKEYNLALKRLSFHDMNLA
DCQSEVLFLLQNLTLQEITFSFCRLFEKRPAQFLPEMVAAMKGNSTLKGLRLPGNRLGNA
GLLALADVFSEDSSSSLCQLDISSNCIKPDGLLEFAKRLERWGRGAFGHLRLFQNWLDQD
AVTAREAIRRLRATCHVVSDSWDSSQAFADYVSTM
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgaggcctggcgcgcccggagttgctggttctgtgaggtagcggcggca
acgaccatggaggccacgtcccgggaggcggcgccagcgaagagctcggcctcgggcccc
agcgctccccccgccctgttcgagctgtgcgggcgggcggtgagcgcccatatgggggtt
ctggaaagcggggtgtgggccctcccaggcccaatacttcaaagcatcttacctctgctc
aatatatattacttggagaggattgaggaaactgccctcaagaaaggcctctccactcag
gccatttggcgccgactatgggatgagctgatgaagacaaggccttccagtttggaaagc
gtgacctgttggcgagccaagtttatggaggcctttttttcccatgttctacgtgggacc
attgatgtgtcttctgacaggcgtctttgtgaccagcgcttctcacctctcctgcatagc
tcccgccatgtccggcagctcaccatctgcaacatgctgcagggtgcaactgagctggtg
gctgagcccaatcgcagggttctggagaccctggccagttccctgcacaccctcaagttc
cgccacctgctgttctctgatgtggctgctcagcagtcacttcggcagctgttgcatcag
cttattcaccatggggctgtcagccaggtgtcgctgtactcctggcctgtacctgagtca
gcccttttcattcttatcctcaccatgagtgctggcttctggcagccaggccccggtggc
ccaccctgccgcctctgtggagaggcctcccgaggccgggctccatcccgagatgaaggg
tccctcctgctgggctcacgccggcctcgccgggatgctgctgagcgatgtgctgcagcc
ctgatggcctcccggcggaagagtgaagccaagcagacggccagagctgcacctgccgct
cgggtaacacgccggagcacacaggagagcctgacagcaggcgggacagaccctaagagg
gagccgctccctccagccacttcccatgaggctcctggcaccaaacgcccaccctctact
ccagccaccacctcctctgcctctgcttcctcttcttccacatcctcgtctaaacgggct
ccagctagctcagccccacagcctaagcccctaaagcgttttaagcgagctgcagggaag
aagggtgctcgcacccgtcaggggtctggtgctgaatctgaagacctatatgactttgtt
ttcattgtggcgggtgagaaagaggatggggaagagatggagatcggggaagtggcttgt
ggagcattggatggatcagatcccagttgcctggggcttccagcactggaggcctcccaa
agattccgcagcatttccaccttggagctcttcacagttccactctccacagaggcggct
ctgacactgtgccacctgctgagctcctgggtgtctctggagagcctcacactctcctat
aatggcctgggctctaatatcttccgcctgctagatagcctgcgggccctgtcaagccag
gctggatgccgcctccgtgccctgcatctcagtgacctgttctcaccactgcccatcctg
gagctgacacgtgccattgtgcgagccctgcccctgttgcgggtcctctctattcgtgtc
gaccaccctagccagagggacaaccctgcagtaccagggaatgcagggccccctagccac
ataattggggatgaggagataccagaaaactgcttggaacagctggagatgggatttcca
cggggagcccagccagccccactgctgtgctctgtactgaaggcctcgggttctctgcag
cagctgtccctggatagtgccacctttgcctctccccaagattttgggcttgtgttgcag
acactcaaagagtacaacctagctctgaagaggctgagcttccacgacatgaatctggct
gactgtcagagtgaggtgctgtttttgctacagaatctgactcttcaagagattaccttc
tccttctgccgtctgtttgagaagcgcccggcccaatttctgcctgagatggttgctgct
atgaagggcaactccacactgaagggcctccggctgccggggaaccgcctggggaatgct
ggcctactggccctggcagatgtattctccgaagattcatcctcctctctgtgtcagctg
gacatcagttccaactgcatcaagccagatgggcttctggagtttgccaagcggctggag
cgctggggccgtggggcctttggtcacctgcgcctcttccagaactggctggaccaggat
gcagtcacagccagggaagccatccgacggctccgcgccacctgccatgtggttagcgac
tcgtgggactcatcccaagccttcgcagattatgtcagcaccatgtga
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