Physeter catodon (sperm whale): 102980099
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Entry
102980099 CDS
T06011
Symbol
SIN3B
Name
(RefSeq) LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3b
KO
K23213
paired amphipathic helix protein Sin3b
Organism
pcad
Physeter catodon (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102980099 (SIN3B)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102980099 (SIN3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
Motif
Other DBs
NCBI-GeneID:
102980099
NCBI-ProteinID:
XP_054936574
Ensembl:
ENSPCTG00005008035
UniProt:
A0A9W2WB71
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All DBs
Position
2:14677436..14717866
Genome browser
AA seq
1138 aa
AA seq
DB search
MAHAGGGGGGPAGRGLSGARWGRSGSAGHEKLPVHVEDALTYLDQVKIRFGSDPATYNGF
LEIMKEFKSQRLSNFWEPQCLLPKNETESIDTPGVIRRVSQLFHEHPDLIVGFNAFLPLG
YRIDIPKNGKLNIQSPLSSQENSHNHSDCAENVKQQMLYKEDKPQVPLESDSVEFNNAIS
YVNKIKTRFLDHPEIYRSFLEILHTYQKEQLSTKGRPFRGMSEEEVFTEVANLFRGQEDL
LSEFGQFLPEAKRSLFTGNGPCEVNSAQKSEHEKNLEHSKKRSRPSLLRPVSAPAKKKMK
LRGTKDLSIATVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFNQELVSGSELLQL
VSPFLGKFPELFAQFKSFLGVKELSFAPPMSDRSGDGISREIDYASCKRIGSSYRALPKT
YQQPKCSGRTAICKEVLNDTWVSFPSWSEDSTFVSSKKTPYEEQLHRCEDERFELDVVLE
TNLATIRVLESVQKKLSRMAPEDQEKFRLDDCLGGTSEVIQRRAIHRIYGDKAPEIIESL
KKNPVTAVPVVLKRLKAKEEEWREAQQGFNKIWREQYEKAYLKSLDHQAVNFKQNDTKAL
RSKSLLNEIESVYDEHQEQHSEGRNAPSSEPHLIFVYEDRQILEDAAALISYYVKRQPAI
QKEDQGTIHQLVHQFVPSLFFSQQLDLGVSEDSADEGRGSPQGQSADPGDRKKPAPGPQS
GAPEEKGASGEAPATEQQPPQHKPLDDVYSLFFANNNWYFFLRLHQTLCSRLLKIYRQAQ
KQLLEYRTEKEREKLLCEGRREKGNDPAMELRLKQPSEVELEEYYPAFLDMVRSLLEGSI
DPTQYEDTLREMFTIHAYVGFTMDKLVQSIARQLHHLVSDDVCLKVVELYLNEKKRGAAG
GNLSSRCVRAARETSYQWKAERCMADENCFKVMFLQRKGQVIMTIELLDTEEAQTEDPLE
VQHLARYMEQYVGTEGASGSPTEGFLLKPVFLQRNLKKFRRWQCEQVRALRGEAKSSWKR
LVGVESACNVDCRFKLSTHKMMFIVNSEDYMYRRGTLGRAKQVQPLVLLRHHQHFEEWHS
RWLEDNVPVEAASLVQDWLMGEEDEDMVPCKTLCETAHVHGLPVTRYRVQYSRRPASP
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatgctggcggcggcggcggcggccccgcgggccgggggctgagcggcgcccgc
tggggtcgctcgggctctgcgggccatgagaagctgccggtgcacgtggaggacgccctc
acctacctggaccaggtgaagatccgcttcggcagcgaccctgccacttacaatggtttc
ttggagatcatgaaggagttcaaaagccagaggttgtcgaacttctgggagcctcagtgc
cttcttccaaaaaacgagacggaaagcatcgatactcctggagtcatccgacgagtgtcg
cagctcttccatgaacaccctgacctgattgttggattcaacgctttccttcctctcggg
tacagaatagacattcccaagaacggcaagttaaacatacagtcgcctctgtcgagccag
gagaattcgcacaaccacagcgactgcgcagagaacgtcaagcagcagatgctatataag
gaggacaaaccccaggtgcccttggagtcagattccgtggaattcaacaacgccatcagc
tacgtgaacaagattaagacccgctttctagatcacccagaaatctacaggtcatttctg
gagatactgcacacttaccagaaggagcagctgagtacgaagggccgtccgttccgaggc
atgtctgaagaggaggtgttcaccgaggtggccaacctcttccgcggccaggaggacctg
ctctccgagtttggacagttcttgcctgaagccaagcggtccctgttcacaggaaatggg
ccgtgcgaagtgaacagtgcccaaaagagtgagcacgagaagaatctggaacacagcaaa
aagcgctctcggccctccctcctccgtcccgtgtctgcaccagccaagaagaaaatgaaa
ctccgtggtaccaaagacctgtccatcgccactgtgggaaagtacgggactctgcaggag
ttctccttctttgacaaggtgcgcagggtgctgaagagccaggaggtctatgagaacttc
ctccgctgcatcgcgctcttcaaccaggagcttgtgtccggctctgagctcctccagctg
gtcagcccatttctagggaaatttccagaactctttgcacagttcaagtccttcctgggg
gtgaaagagctgtccttcgccccacccatgagtgacagatccggggatggaataagccgg
gaaatcgactacgcctcatgcaagcgcatcggatccagctaccgggcgctccccaaaacc
taccagcagcccaagtgcagcgggaggacggccatctgcaaggaggtactgaacgacacc
tgggtgtccttcccctcctggtcagaggactccaccttcgtcagctccaagaagacaccc
tacgaggagcagctgcaccgctgtgaggacgagcgtttcgagttagacgttgtcctggag
accaacctggccacgatccgggtgttggaaagcgtgcagaagaagctctcccggatggca
ccagaagaccaggagaagttccggctggacgactgtctggggggcacgtcggaggtgatc
cagcgccgcgccatccaccgcatttacggcgacaaggctccggagatcattgagagcctc
aagaagaaccctgtcaccgctgtccccgtcgtcctgaaaaggctgaaggccaaagaggag
gagtggcgggaggcccagcagggcttcaacaagatctggagggagcagtatgagaaggcg
tacctcaagtccctggaccaccaggccgtgaacttcaagcagaatgacaccaaggccctt
cgctccaagagcttgctcaatgagattgagagcgtctatgacgagcaccaggagcagcac
tcggagggccgcaatgccccctccagcgagccgcacctcatcttcgtgtacgaggaccgg
cagatcctggaggacgcagccgccctcatcagctactacgtgaagcggcagccggccatc
cagaaggaggaccagggcaccatccaccagctggtgcaccagttcgtgcccagcctcttc
ttctcccagcagctggacctgggcgtgtccgaggactccgccgatgagggccgggggagc
ccccaggggcagagtgcagaccctggtgaccggaagaagccagcgcccggaccgcagagc
ggcgccccggaggagaagggggcctcgggcgaggcgccggccacggagcagcagccaccg
cagcacaagcccctggacgacgtctacagcctcttctttgccaacaacaactggtatttc
ttcctgcgcctccatcagaccctgtgctccaggcttctgaagatctaccgccaggcacag
aagcagctcctggagtaccggacggagaaggaaagggagaaactgctctgcgagggccgc
cgggagaagggcaacgaccctgccatggagctgcggctgaagcagccaagtgaggtggag
ctggaggagtactacccggccttcctggacatggtgcggagcctgctggagggcagcatc
gaccccacgcagtacgaggacaccctgcgcgagatgttcaccatccacgcctacgtgggc
ttcaccatggacaagctggtgcagagcatcgcccggcagctgcaccacctcgtgagcgac
gatgtctgtctgaaggtggtggagctctacctgaatgagaagaagcggggcgctgccggc
gggaacctgtcctcccgctgtgtccgcgccgccagggagaccagctatcagtggaaggcc
gagcggtgcatggctgatgagaactgctttaaggtgatgttcctccagcgcaaagggcag
gtgatcatgaccattgagctcctggacaccgaggaagcccagacagaggacccactagag
gtgcagcacctggctcggtacatggagcagtacgtggggaccgagggtgcgtccggctcg
cccaccgagggcttcctcctgaagcctgtgttcctgcagaggaacctcaagaagttccgt
aggtggcagtgtgagcaggtgcgcgcgctgcggggcgaggccaagagctcctggaagcgg
ctggtcggggtggagagcgcctgcaacgtggactgccgcttcaaactcagcacccacaag
atgatgttcatcgtgaactccgaggactacatgtaccgccgcgggacactcggccgggcc
aagcaggtgcagcccctggtcctgctgcgccaccaccagcacttcgaggagtggcacagc
cgctggctggaggacaacgtgccggtggaggcagccagcctggtgcaggactggctgatg
ggcgaggaggacgaggacatggtgccctgcaagacgctttgcgagacggctcacgtgcac
gggctgccggtgacccgctaccgagtgcagtacagccgccgcccggcctcgccctga
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