Physeter catodon (sperm whale): 102980515
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Entry
102980515 CDS
T06011
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03013
Nucleocytoplasmic transport
pcad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102980515 (SRRM1)
03015 mRNA surveillance pathway
102980515 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102980515 (SRRM1)
03041 Spliceosome [BR:
pcad03041
]
102980515 (SRRM1)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102980515 (SRRM1)
Spliceosome [BR:
pcad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
102980515 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
102980515
NCBI-ProteinID:
XP_007121178
Ensembl:
ENSPCTG00005006969
UniProt:
A0A2Y9FEJ7
LinkDB
All DBs
Position
3:complement(15708112..15737494)
Genome browser
AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKREKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPAVRRGASS
SPQRRQSPSPSSRPIRRVSRTPEPKKMKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPA
PPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAAAAAAVTPVTPAAIAAPTTASAQEEPEAEPEPKKETESEAEDNLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaattcgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgctttcctagaactgaagaaagaagaaataaaacagagacagattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggaaaaggaagaaaaagaa
agcagcagagaaaaaagggagcggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagagaagaaggaaaaaact
ccagagctcccagagccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaagcctgaaccagtaccagagcctaaagaaccttct
ccggagaaaaactccaaaaaggaaaaggaaaaggagaagacccgaccaagatctcggtcg
cgttccaagtcaagatcccggacacgttctcgctctccttctcatactcgaccgagaagg
cgccatagatcccgatcaagatcatactcacctagaaggcggccaagcccaagaagacgg
ccatctcctcgaagaagaactccaccgagacgaatgcctcctccaccaaggcatagaagg
agtagatctccagtgagacgaagaaggcgttcatcggcatccttgtccgggagtagctcg
tcctcttcttcatctcgttcccggtcaccgccaaagaagcctccaaagaggacatccagc
ccccctcgaaaaactcgtaggttatctccttcagcaagtcctccgaggcgaaggcacagg
ccatcacctccagcaactccaccaccaaaaactcgtcattccccgacaccccagcagtca
aaccgtacgaggaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgaca
aaacataaaggtactgagaaaagagagtccccttcaccagcacccaagcctagaaaagta
gagttatctgaatcagaagaagataaaggtggcaaaatggctgcagcagattctgtgcag
cagagacgccagtacagacgacagaaccagcagtcttcctccgattctggctcctcctct
tcctcagaagatgagcgacccaaaaggtcccacgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagagact
tcccctcggatgcagatgggaaagcgatggcaatcgccagtgactaaaagtggtagacgg
aggagaagtccctccccaccgcctaccagaaggcgacgttctccttctcctgctcctccg
cctcgtcgacgcaggtctcccacaccaccaccgcgacgaaggactccttctcctccccca
cgtcgtcgctcaccttccccaagaagatactctcctccaatacagaggagatattctcct
tctccacctccaaagagaagaacggcttcaccccctccccctcctaaacgaagggcatca
ccgtctccaccaccaaagcgtcgggtctcccattcgccacctcccaaacaaagaagctcc
ccggtcaccaagagacgttcgccttcgttgtcatcaaagcataggaaagggtcttccccg
agccgatctacccgggaggcccggtcaccacaaccaaacaaacggcattcgccctcacca
cggcctcgagctcctcagacctcctcaagtcctccagctgttcgaagaggagcatcatca
tcaccccaaagaaggcagtccccatctccaagttctaggcccattaggagagtctccagg
actccggaacccaaaaagatgaaaaaagctgcctcaccaagccctcagtcggtaaggagg
gtctcatcttcccgatctgtctcgggatctcctgagccagcagctaaaaaacccccagca
cctccatcccctgtccagtctcagtcaccctctaccaactggtcaccagcggtaccggtt
aaaaaggctaaaagcccaacaccaagtccatcaccggcaaggaattcagacccagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aaacacaaaaaacacaagaaggaaaaggctgcagctgcagctgctgtaacccctgtaacc
cctgcagccattgctgctcccacaaccgcgtcagcacaggaggaaccagaggcagagcca
gagcctaagaaggagactgaaagtgaggctgaagataaccttgatgacttagaaaagcac
ctgcgtgaaaaggccctgagatcaatgcggaaggctcaagtgtccccacagtcctag
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