Physeter catodon (sperm whale): 102982346
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Entry
102982346 CDS
T06011
Symbol
PRPF31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 isoform X2
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102982346 (PRPF31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcad03041
]
102982346 (PRPF31)
Spliceosome [BR:
pcad03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
102982346 (PRPF31)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
102982346
NCBI-ProteinID:
XP_007113133
Ensembl:
ENSPCTG00005006633
UniProt:
A0A2Y9F2F3
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All DBs
Position
17:2903888..2920791
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AA seq
499 aa
AA seq
DB search
MSLADELLADLEEAAEEEEGGSYGEEEEEPAIEDVQEETQLDLSGDSVKSIAKLWDSKMF
AEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSK
RFPELESLVPSALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLS
EEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTN
LSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCT
LAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYR
KMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATKARI
SKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYF
SSMAEFLKVKGEKSGVMST
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgacgagctcctagctgacctcgaggaggcggcagaagaggaggaagga
ggaagctacggggaggaagaggaggagccggcgatcgaggatgtgcaggaggagacccag
ctggatctttccggagattcggtcaagagcatcgccaagctgtgggacagcaagatgttc
gctgagatcatgatgaagattgaggagtatatcagcaagcaggccaaagcttcggaagtg
atggggcccgtggaggcggcccccgagtaccgggtcatcgtggacgccaacaacctgacg
gtggaaatcgagaacgagctgaacatcatccataagttcatccgggataagtactcgaag
cggttccccgaactggagtctctggtccccagtgcactggattacatccgcaccgtcaag
gagctgggcaacagcctggacaagtgcaagaacaacgagaacctgcagcagatcctgacc
aacgccaccatcatggtggtcagcgtcaccgcctccaccacccaggggcagcagctgtcg
gaggaggagctggaacggctggaggaggcctgcgacatggcgctggagctcaacgcctcc
aagcaccgaatctacgagtacgtggagtcgcgcatgtccttcatcgcgcccaacctctcc
atcatcatcggggcttccactgccgccaagatcatgggggtggccggcggcctgaccaac
ctctccaagatgcccgcctgcaacatcatgctgctcggggcccagcgcaagacgctgtcc
ggcttctcatccacctcggtgctgccccacaccggctacatctaccacagcgacatcgtg
cagtccctgcccccggatctccggcggaaggcggcccggctggtggcggccaagtgcacg
ctggcagcccgagtggacagtttccatgagagcacggagggcaaggtgggctacgagctg
aaggatgagatcgagcgcaagttcgacaagtggcaggagccgccgcccgtgaagcaggtg
aagccgctgcccgcgcccctcgacgggcagcgtaagaagcgaggcggccgcaggtaccgc
aagatgaaggagcggctggggctgactgagatccggaagcaggccaaccgcatgagcttc
ggggagatcgaggaagacgcctaccaggaggacctgggcttcagcctgggccacctgggc
aagtcgggcagcgggcgggtgcggcagacacaggtgaacgaggccaccaaagccaggatc
tccaagacgctgcagcggaccctgcagaagcagagcgtggtgtacggcgggaagtccacc
atccgcgaccgctcctcggggactgcttccagcgtggccttcaccccgctccagggcctg
gagattgtgaacccacaggcagcagagaagaaggtggctgaggccaaccagaagtacttc
tccagcatggccgagttcctcaaggtcaagggtgagaagagcggcgtcatgtccacctga
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