Physeter catodon (sperm whale): 102984195 Help Entry 102984195         CDS       T06011                                  Symbol COL1A1 Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism pcad  Physeter catodon (sperm whale) Pathway pcad04151   PI3K-Akt signaling pathway pcad04510   Focal adhesion pcad04512   ECM-receptor interaction pcad04611   Platelet activation pcad04820   Cytoskeleton in muscle cells pcad04926   Relaxin signaling pathway pcad04933   AGE-RAGE signaling pathway in diabetic complications pcad04974   Protein digestion and absorption pcad05146   Amoebiasis pcad05165   Human papillomavirus infection pcad05205   Proteoglycans in cancer pcad05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:pcad00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     102984195 (COL1A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102984195 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102984195 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102984195 (COL1A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     102984195 (COL1A1)   09152 Endocrine system    04926 Relaxin signaling pathway     102984195 (COL1A1)   09154 Digestive system    04974 Protein digestion and absorption     102984195 (COL1A1)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     102984195 (COL1A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     102984195 (COL1A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     102984195 (COL1A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     102984195 (COL1A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     102984195 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pcad00536]     102984195 (COL1A1) Glycosaminoglycan binding proteins [BR:pcad00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102984195 (COL1A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  102984195 NCBI-ProteinID:  XP_007128607 Ensembl:  ENSPCTG00005020321 UniProt:  A0A2Y9FQF2 LinkDB All DBs Position Unknown AA seq 1463 aa AA seqDB search MFSFVDLRLLLLLAATALLTHGQEEGQEEGQEEDIPPVTCVQNGLRYHDRDVWKPVPCQI CVCDNGNVLCDDVICDEIKNCPNAKVPAGECCPVCPEGEASPTDQETTGVEGPKGDTGPR GPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGISVPGPM GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRP GERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQM GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGSTGPAGPPGFPGAVGAKGEAGPQGSR GSEGPQGVRGEPGPPGPAGAAGPAGNPGTDGQAGAKGANGAPGIAGAPGFPGARGPSGPQ GPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPAGLP GPPGERGGPGSRGFPGSDGVAGPKGPAGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLT GSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGSRGQAGVMGFPGPKGAAGEPGKAGERGVP GPPGAAGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGESGKPGEQ GAPGDIGAPGPSGARGERGFPGERGVQGPSGPAGPRGSNGAPGNDGAKGDAGAPGAPGNQ GAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDK GETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGAP GAAGPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPSGPA GKEGSKGPRGETGPAGRAGEVGPPGPPGPAGEKGAPGADGPAGAPGSPGPQGIAGQRGVV GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAE GSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPV GARGPTGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPR GPPGSAGTPGKDGLNGLPGPIGPPGPRGRTGDAGPAGPPGPPGPPGPPGPPSGGYDFSFL PQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRD LKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTEPSVAQKNWYISKNPKDK RHVWYGESMTGGFQFEYGSQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQT GNLKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIID VAPLDVGAPDQEFGIDVGPVCFL NT seq 4392 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg cacggccaagaggagggccaagaagaaggccaagaagaagacatcccaccagtcacctgc gtacagaacggcctcaggtaccatgaccgtgacgtgtggaaacccgtgccctgccagatc tgtgtctgcgacaacggcaacgtgttgtgcgatgacgtaatctgcgacgaaatcaagaac tgtcccaacgccaaagtccccgcgggcgagtgctgccccgtctgcccggaaggcgaggcg tcacccacggaccaagaaaccactggagtcgagggacccaaaggagacactggcccccga ggcccaaggggacccgctggcccccctggccgagatggcattcctggacaacctggactt cccggaccccccggacccccaggacctcccggaccccctggcctcggaggaaactttgct ccccagatgtcttacggctatgatgagaaatcaacaggaatttctgtgcctggccccatg ggtccttctggtcctcgtggtctccctggcccccctggcgcacctggtccccaaggtttc caaggcccccctggtgagcctggcgagcccggagcctcaggtcccatgggtccccgtggt ccccctggcccccctggcaagaacggagatgatggtgaagctggaaagcctggtcgtcct ggtgagcgcgggcctcctggacctcagggtgctcggggattgcccggaacagctggcctc cctggaatgaagggacacaggggtttcagtggtttggatggtgccaagggagatgccggt cctgctggtcccaagggtgagcctggtagccctggtgaaaatggagctcctggtcagatg ggcccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggtgct cgtggaaatgatggtgctactggtgctgctggaccccctggttccactggccccgctggt cctcctggtttccctggtgctgttggtgctaagggtgaagctggtccccaaggatcccga ggctctgaaggtccccaaggtgtgcgtggtgagcccggcccccctggccctgccggtgcc gctggccctgccggaaaccctggtactgatggacaagctggtgctaaaggtgccaatggc gctcctggcattgctggtgctcctggcttcccgggcgcccgaggcccctctgggccccag ggtcccagtggcccccctggtcccaagggtaacagcggtgaacctggcgctcctggcaac aaaggagacactggcgccaagggagagcctggccccactggtattcaaggtccccctggc cctgctggggaagaaggaaagcgaggagcccgaggtgaacccggacctgctggcctgcct ggaccccctggcgagcgtggtggacctggtagccgcggtttccctggctcagacggtgtt gctggtcccaagggtcccgctggtgaacgtggtgctcctggccctgctggccccaaaggt tctcctggtgaagctggtcgccccggtgaagctggtctgcctggtgccaagggtctgact ggaagccctggcagcccaggtcctgatggcaaaactggcccccctggtcctgctggtcaa gatggccgccccggacccccaggccctcctggtagccgtggtcaggccggtgtgatgggt ttccctgggcctaaaggtgctgctggagagcctggcaaggctggagaacgaggcgttcct ggaccccccggcgctgctggtcctgctggcaaagacggagaagctggagctcagggacct cccggacctgctggccctgctggtgagagaggtgaacaaggccctgctggctcccccgga ttccagggtctccctggccctgctggtcctcctggtgaatcaggcaaacccggtgaacag ggtgctcctggagacattggtgcccccggcccctctggagcaagaggcgagagaggtttc cccggcgagcgtggtgtgcaagggccctccggtcctgcaggtccccgtgggtccaacggt gcccctggcaatgatggtgctaagggcgatgctggtgcccctggagcccctggtaaccag ggcgcccctggccttcaaggaatgcctggtgaacgaggtgcagcaggtctcccaggccct aagggtgacagaggcgatgctggtcccaaaggtgctgatggtgctcctggcaaagatggc gtccgtggtctgactggtcccattggtcctcctggccccgctggcgcccccggtgacaag ggtgaaactggtcccagcggccctgctggtcccactggagctcgtggtgcccccggagac cgtggtgagcctggtccccccggccctgctggcttcgctggcccccctggtgctgatggc caacctggtgctaaaggtgaacctggtgatgctggtgctaaaggcgatgctggtgccccc ggcgctgctggacccactggacctcctggtcccattggtaacgttggtgctcccggaccc aaaggtgctcgtggcagcgctggtccccctggtgctactggtttccctggtgctgctggc cgagtcggtccccctgggccctctggaaatgctggaccccctggaccttctggtcctgct ggcaaagaaggcagcaaaggcccccgtggtgagactggccccgctgggcgtgctggtgaa gtcggtcctcccggtccccctggccccgctggtgagaaaggagcccctggtgctgatgga cctgctggcgctcccggctctcccggacctcagggtattgctggacagcgtggcgtggtc ggcctgcccggtcagcgaggagaaagaggcttccctggtcttcctggcccctctggtgaa cccggcaaacaaggtccttctggagcaagtggtgaacgtggcccccctggtcccatgggc ccccccggattggctggaccccctggcgagtctggacgtgagggagcccctggtgctgaa ggatcccctggacgagatggttctccgggccccaagggtgaccgtggtgagaccggccct gctggaccccctggtgctcctggtgcccctggtgcccccggccccgtcggccctgctggc aagagcggcgatcgtggtgagactggtcctgctggtcctgctggtcccattggccccgtt ggtgcccgcggccccactggaccccaaggcccccgtggtgacaagggtgagacaggcgaa cagggcgacagaggcattaagggtcaccgtggcttctctggtctccagggtccccctggc cctcccggctctcctggtgagcaaggtccctccggagcttctggtcctgctggtccccgc ggtccccctggctctgctggtactcctggcaaagatggactcaacggtctcccaggcccc atcggtccccctggtcctcgtggtcgcactggtgatgctggtcctgctggtccccccggc cctcccggaccccctggtccccctggtcctcccagcggtggttacgacttcagcttcctg ccccagccacctcaagagaaggctcacgatggtggccgctactaccgggccgatgatgcc aatgtggtccgtgaccgtgacctcgaggtggacaccactctcaagagcctgagccagcag atcgagaacatccggagccctgaaggcagccgcaagaaccctgcccgcacctgccgtgac ctcaagatgtgccactccgactggaagagcggagaatactggattgaccccaaccaaggc tgcaacctggatgccattaaggtgttctgcaacatggagacaggtgagacctgcgtgtat cccactgagcccagcgtggcccagaagaactggtacatcagcaagaaccccaaggacaag aggcacgtctggtacggcgagagcatgaccggcggattccagttcgagtacggcagccag ggctccgatcctgccgatgtggccatccagctgactttcctgcgcctgatgtccactgag gcctcccagaacatcacctaccactgcaagaacagcgtggcctatatggaccagcagacc ggcaacctcaagaaggccctgctcctccagggctccaacgagattgagatccgggccgag ggcaacagccgcttcacctacagcgtcacctacgacggctgcacgagtcacaccggagcc tggggcaagacagtgatcgaatacaaaaccaccaagacctcccgcttgcccatcatcgat gtggcccccttggacgttggcgccccagaccaggaattcggcatcgacgttggccctgtc tgcttcctgtaa

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