Physeter catodon (sperm whale): 102987265
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Entry
102987265 CDS
T06011
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pcad
Physeter catodon (sperm whale)
Pathway
pcad04142
Lysosome
pcad04144
Endocytosis
pcad04721
Synaptic vesicle cycle
pcad04961
Endocrine and other factor-regulated calcium reabsorption
pcad05016
Huntington disease
pcad05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102987265 (CLTC)
04142 Lysosome
102987265 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
102987265 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
102987265 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102987265 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
102987265 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102987265 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcad04147
]
102987265 (CLTC)
Membrane trafficking [BR:
pcad04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102987265 (CLTC)
Exosome [BR:
pcad04147
]
Exosomal proteins
Proteins found in most exosomes
102987265 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
Motif
Other DBs
NCBI-GeneID:
102987265
NCBI-ProteinID:
XP_007122593
Ensembl:
ENSPCTG00005021175
UniProt:
A0A2Y9FGX5
LinkDB
All DBs
Position
14:complement(102670033..102736932)
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgccaattcgttttcaggagcatcttcagctccagaacctgggtata
aacccagcaaacatcggcttcagtaccctgactatggagtcagacaaattcatctgcatt
agagagaaagtaggagagcaggcccaggtggtaattattgatatgaatgacccaagtaat
ccaattcgaagaccaatttcagcagacagcgccatcatgaatccagccagcaaagtaatt
gcgctaaaagctgggaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcccataccatgaccgatgatgtcaccttctggaaatggatctctttgaatacggttgct
cttgttacggataatgcagtttatcattggagtatggaaggagagtctcagccagtgaaa
atgtttgatcgccattctagccttgcagggtgccagattatcaattatcgtactgatgca
aagcaaaagtggttacttctgactggcatatctgcacagcaaaatcgtgtggtaggagct
atgcagttatattctgtagataggaaagtgtctcagcccattgaaggacatgcggctagc
ttcgcacagtttaagatggaaggaaatgcagaagagtcgacgttattttgttttgcagta
cggggtcaagctggagggaagttacatatcattgaagttggcacaccacctacagggaac
cagccctttccaaagaaggcagtggatgttttctttcctccagaagcacaaaatgacttt
cctgttgcaatgcagatcagtgaaaagcatgatgtagtattcttgattactaagtatggt
tatatccacctgtatgatcttgagactggtacctgcatctacatgaatagaatcagtgga
gaaacaatctttgtcactgcacctcatgaagccacagctggaataattggagtaaacaga
aagggacaagttctctcagtatgtgtggaagaagaaaacataattccttatatcaccaat
gtcctacaaaatcctgatttggccctgagaatggctgtacgtaacaacttggctggtgct
gaagaactctttgcccggaaatttaatgctctttttgcccagggaaattactcagaggca
gcaaaggtggctgctaatgcaccaaagggaatccttcgtaccccagacaccatccgtcgg
ttccagagtgtcccagctcagccaggtcaaacttctcccctacttcagtactttggaatc
cttttggaccagggccagctaaacaaatatgaatccttagaactgtgtaggcctgtactt
cagcaagggcggaaacagcttttggagaaatggttgaaagaagataagctggaatgctct
gaagaactaggagaccttgtgaaatccgtggaccctacattggcacttagtgtgtaccta
agggctaatgtgccaaataaagtcattcagtgctttgcagaaacaggtcaagtccagaag
attgttttatatgctaaaaaagttggatataccccagactggatctttctgctgagaaat
gttatgcgaatcagtccagatcaggggcagcagtttgctcaaatgttagttcaggatgaa
gaacctcttgctgatatcacacagattgtcgatgtgtttatggaatacaatctaattcag
cagtgtactgcattcttgcttgatgcactgaagaataatcgcccatctgaaggtccttta
cagacacggttgcttgagatgaaccttatgcatgcacctcaagtcgcagatgctattcta
gggaatcagatgttcacacattatgaccgggctcatatcgctcagctgtgtgagaaggct
ggcctcctgcagcgtgcattagaacacttcactgacttatatgatataaagcgtgcggtt
gttcatacccatcttcttaaccctgagtggttagtgaattactttgggtccttatcagta
gaagactccctggaatgcctcagagccatgctatctgccaatattcgtcagaatctacag
atctgtgtgcaagtggcttctaagtatcacgaacaactgtccactcagtctctgattgaa
ctttttgaatctttcaagagttttgaaggtcttttttattttctgggatccattgttaac
tttagtcaggacccagatgtgcactttaaatatattcaggcagcttgcaagacggggcag
atcaaagaagtagaaagaatctgcagagaaagcaactgctatgatccggagcgagtcaag
aattttctcaaggaagcaaagctaacagatcaattaccacttatcattgtgtgtgatcga
tttgactttgtccatgatttggtgctctatttatatagaaataatcttcaaaagtatata
gagatatatgtacagaaggtgaatccaagtcgacttcctgtggttattggaggattactt
gatgttgattgctctgaagatgtcattaaaaacttgattcttgttgtaagaggtcaattc
tctactgatgagcttgtcgctgaggttgaaaaaagaaacagattgaaactgcttctgcct
tggctggaggctagaattcatgagggctgtgaagagcctgctactcacaatgctttagcc
aaaatctacatagacagtaataacaacccagagcgatttcttcgggaaaatccttattat
gacagtcgtgttgttggaaagtattgtgagaagagagatccacatctagcctgtgttgct
tatgaacgtggccagtgtgatctggaacttattaatgtttgcaatgagaattccctcttc
aaaagtctttcccgctatctggtacggcgaaaggatccagaactgtggggtagtgtgctg
ctggaaagcaatccttacaggagacccctcattgatcaggttgtacagacagccttgtct
gagactcaggaccctgaagaagtgtcagtaactgtcaaggcttttatgactgcagacctt
cctaatgaactcattgaactgctggagaaaattgtccttgataactctgtattcagtgaa
cacaggaatctgcaaaacctcctcatcctcactgcaatcaaggctgaccgtacccgtgtt
atggaatatattaaccgcctggataattatgatgccccagatattgccaatatcgccatc
agcaatgagctgtttgaagaagcatttgccatttttcggaaatttgacgtcaatacttca
gcagtgcaggtcttgatcgaacatattggaaacttagatcgggcatatgagtttgctgaa
cgctgcaatgaacctgcagtctggagtcagctcgcaaaagcccagctgcagaaaggaatg
gtgaaagaagccattgattcttacatcaaagcagatgatccttcatcctacatggaagtt
gttcaggctgccaatactagtggaaactgggaagaactggtgaagtacttgcagatggcc
cgtaagaaggctcgtgaatcctatgtggagacagaattgatatttgcactggctaaaaca
aaccgcctcgcagagttagaagagttcatcaatgggccaaataacgctcatatccagcaa
gttggtgaccgctgttatgatgaaaaaatgtatgatgctgctaagttgttgtacaataat
gtttccaattttggacgcttggcatctactctggttcatctgggtgaatatcaggcagct
gttgatggagctaggaaagctaatagtactcgaacatggaaagaggtctgctttgcctgt
gtagatgggaaagagttccgtctcgctcagatgtgtggacttcatattgtagtacatgca
gatgaattggaggaacttatcaactactatcaggatcgtggatattttgaagagctgata
accatgttggaagcagcactgggacttgagcgagctcatatggggatgttcaccgaatta
gctattctgtactctaagtttaagccacagaaaatgagggagcacctggagctgttctgg
tccagagtgaatattcctaaggtgctaagagctgcagaacaagctcatctttgggcagaa
ttggtgtttttgtatgacaagtacgaagaatatgataatgccataattaccatgatgaat
catccgactgatgcgtggaaagaagggcagttcaaagatatcattaccaaggttgccaac
gtggaactatactacagagcaatacaattctacttagaattcaagccactgttgttaaat
gatttgctgatggtgctgtctccacggttggatcatactcgtgcagtcaattatttcagc
aaggttaaacagctaccactggtgaaaccatatttgcgttcagtccagaaccacaacaac
aaatctgtgaatgaatcactgaacaacctctttattacagaagaagattatcaggctctt
cgaacatcgatagatgcttatgacaactttgacaatatctcgcttgctcagcgtttggaa
aaacatgaactcattgagttcagaagaattgctgcttatctcttcaaaggcaacaatcgc
tggaaacagagtgtggagctgtgcaagaaagatagcctgtacaaggatgcaatgcagtat
gcctctgaatctaaagatactgagttggctgaagaactcctacagtggtttttgcaggaa
gaaaaaagagagtgctttggagcttgtctctttacttgttatgatcttttaaggccagat
gttgtcctggaaactgcatggaggcacaatatcatggattttgccatgccctatttcatc
caggtcatgaaggaatacctgacaaaggttgatgcaataaaggaaaaggtggataaatta
gatgcttcagaatcactgagaaaagaagaagaacaagctacagagactcaacctattgtt
tatggtcagccccagttgatgctgacagcaggacccagtgttgcagtccctccccaggca
ccttttggttatggttacactgcaccaccctatgggcagccacagcctggctttgggtac
agcatgtga
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integrated database retrieval system
