Pasteurella canis: K7G93_000518
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Entry
K7G93_000518 CDS
T07908
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pcai
Pasteurella canis
Pathway
pcai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K7G93_000518 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcai03400
]
K7G93_000518 (recB)
Enzymes [BR:
pcai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K7G93_000518 (recB)
DNA repair and recombination proteins [BR:
pcai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K7G93_000518 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_11
AAA_30
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UEC23765
LinkDB
All DBs
Position
553253..556924
Genome browser
AA seq
1223 aa
AA seq
DB search
MDTVDHLNPLTTPLNQVCLIEASAGTGKTYTIGSLYLRLLLQAGEHCFSRPLNVQDILVV
TFTEAATEELKGRIRERIHQAKKAFIAYKVEGVKALAHDPFLMELVGFIQDIDVAIQRLK
IAEQTMDLAAIYTIHGFCRRMLMQYAFNSGIHFNLELVKDESELLERLFKDFWRENFYSQ
PLEIANYIHQVLVSPQAVLKKLRSHISHQLEPDIGSKAWLSMSLVEFLQQYVLPKQALVQ
QLKQQWLAHETELRSLIFNELDKNYKKGEKKSLQRTRFKKNYVPSWFNSIQAWARSALTT
KLPETLTKYFSQQALVSYADEGAEPISHSVFQLVDDVIMNTAEQAIDEKVVLYHYLRGVQ
QKLIDYKLNHTQKNFDDLLRLLKQALYSTQGDELAQFIRLQYPFAMIDEFQDTDVQQYHI
FAKIYIHQQPVENGFIMIGDPKQAIYKFRGADIFTYFKAAQQADMRFTLGVNWRSEQSLV
KCINALFDFQSDSLPFLYPQIQFHPVIASQTQTKFKLHGKIEPALRCYIGDLGESKQSGF
SKAQKQAMAQICAISIQNWLQSAQENQAFFALDNKIKPLSAERIAVIVRNWTEAELVIQA
LQQLGIASVYLSDRSNVFDCDEAKQLVLILTACLNPFSERHLLNAIATRIFALTTAEISA
IKQDEHRWTEQVERFIHYQRIWQKQGILAMLHQLFLTEKITEKLLASVGGERKTTDLLHL
AELLQEASRLNGSAASLLRWFEKQIQGEDRQEGQQIRLESERQLVKIVTIHKSKGLEYDL
VWLPFIADALKDNKQLIQTYYDSCAQQVLWDVQQQHQVEIEQEQRAEEMRLLYVALTRAK
YQIALALPTSFLPSWNCLQYVLTAGKMDRHEEVRSVLAEFQQRMRNQQVDITIEDFSVLQ
PKKVSSYYAPKDALHYAEFSGEIEKNWQVTSFTAISAQHERTKQFYLTKQEEQTSTATFS
AELKDYKLEQGTQQDIYLPQSIVEGYPLGYTPFDLPAGAQVGQILHQYFEQNNFNQPIEL
TALQQICQQLQLDQQWLGSLQTWLTRILNTPLFENENLKLADLAPQDCLKEMAFYLQFKH
TFQANKFNQLLQKYQFISTPLQLQDLTHGIQGMLRGFIDLVFRYQGKYYLLDYKSNKLGH
DFVDYAPEQLKKVMVEQHYDWQYLFYTVALHRYLTQRDQNYHYERDFGGVIYTFLRGMNG
KDNYGIYFNKPNADLIAELEELL
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggatacggtcgatcatctcaatcctctcactacacctctcaaccaagtttgtctgata
gaagcttctgctggtacagggaaaacttatactattggttcactctatttacgtttatta
ctgcaagcaggagaacattgtttttctcgaccattaaacgtacaagacattttagttgta
acttttacagaggcagcaactgaggagctaaaaggacgtatccgcgaacgtattcatcag
gcgaaaaaagcgtttattgcttataaagttgaaggcgtgaaggcattagcacatgatccc
tttcttatggaattagtcggttttatccaagatattgatgtcgcaatacaacgtttaaaa
atcgctgaacaaacgatggatctggcagcaatttatacaattcatggtttttgccgtcgt
atgttaatgcaatatgcgtttaattctggcattcatttcaatttagaattagtaaaagat
gaaagtgagctgctagagcgtttattcaaggatttttggcgtgaaaatttttattcacaa
cctttagaaattgctaattatatccaccaagtattagtgtcgccgcaagcagtccttaaa
aaattacgcagtcatatatcacatcagttagaacccgatattggttctaaagcatggctg
agtatgtcactagtcgagtttttacaacagtatgtcttacctaaacaagctcttgtacaa
caattaaagcaacaatggttagcacatgagactgaattacgctcgttgattttcaatgaa
ttagataaaaattataaaaaaggtgagaaaaagtctttacaacgaactcgctttaaaaaa
aattatgtgccgagttggtttaacagtatacaagcttgggcaagatcagcattaacaact
aaattacctgaaacattaaccaaatattttagccaacaagcgttagtgagttatgcagac
gaaggggcagaacccatttctcattccgtttttcagctagttgatgatgtgataatgaat
acagcagaacaagcaattgatgagaaagtcgtgttatatcattatttacgaggtgtacaa
caaaaactaattgactataaattgaatcacacacagaaaaactttgatgatttattacgc
ttattaaagcaggcactttattctactcaaggtgacgagctcgcccaatttattcgctta
caatatccgtttgctatgattgatgaatttcaagatacggatgtacagcagtatcacatt
ttcgccaagatttatattcaccagcagcctgttgaaaatggctttattatgattggtgat
cctaagcaagcgatttataaatttcgtggtgcagatatttttacgtatttcaaagcggca
cagcaagcggatatgcgtttcactttaggcgtcaactggcgatcggagcaaagcttagtg
aagtgtattaacgctttgtttgattttcaatcagatagtttaccttttttatatccacaa
attcaatttcatcctgttattgctagtcagactcaaactaaattcaaattacatggcaaa
attgaacctgcattacgttgctatattggtgatcttggtgaaagtaaacagtcaggattc
agtaaagcacaaaaacaagctatggcacaaatttgtgctatttcaattcaaaactggttg
caaagtgcgcaagaaaatcaagccttttttgctttggataataaaataaaacctttaagt
gctgagcggattgccgtaattgtacgaaactggactgaagccgagttagtgatacaagcc
ctacaacagttaggtatcgcatcggtctatctttctgatcgtagtaatgtgtttgattgt
gatgaagctaaacaattagttttaattttaactgcttgtctaaacccatttagtgaacgt
catcttttaaatgcgattgcaacacgtatttttgctttaacaacagctgagattagcgca
attaaacaagatgaacatcgttggacagaacaagtagagcgttttattcattatcagcgt
atttggcagaaacagggaattttagccatgctccatcagcttttcctcacagaaaagatt
acggagaaattactggctagcgtaggtggagaacgtaaaacgacagatctattacatctt
gctgaattattacaagaagcaagtcgcttaaatggcagtgcggcaagtttgttacgttgg
tttgaaaaacaaattcaaggtgaagatcgccaagagggtcaacaaattcgcttggaaagt
gaacggcagctcgtcaaaattgtgactattcataaatctaaaggattagaatatgactta
gtttggttaccttttattgctgatgcattaaaagataataaacaattgattcaaacatat
tatgatagttgtgcacaacaggtattatgggatgtgcaacagcagcatcaagtagaaatt
gagcaagagcaacgagcagaggaaatgcggctactttatgtcgccttaactcgagcgaag
tatcaaattgcattagcattgcctacttcttttttaccaagttggaattgcttgcaatat
gttttgactgcaggaaaaatggatcggcatgaagaagtgcggtcagttttagctgagttt
caacagcgtatgcggaaccagcaagtggacattaccattgaggatttttctgtattacag
cctaaaaaggtatcctcatattatgctccaaaagatgcactacattatgctgaatttagc
ggagagattgaaaaaaattggcaagtgacgagctttacagctataagtgctcagcacgaa
agaacaaaacagttttatctgacaaagcaagaggaacagacatcgacagctacattttcc
gctgaattgaaggattataaattagagcagggcactcagcaggatatttatttaccgcaa
tcaattgttgaaggctatcctttaggttatacaccttttgatttacctgctggtgctcaa
gtaggtcaaattcttcaccaatattttgaacaaaataacttcaaccaacctattgaatta
acagcactccaacaaatttgtcagcagttacaacttgatcagcaatggcttggatcatta
caaacatggttaactcgtattttaaatacaccattatttgaaaatgaaaatcttaaactt
gcagatttagcccctcaagattgtttgaaagaaatggcattctatttgcagttcaaacat
acattccaagctaataaatttaatcagctattacaaaagtatcaattcatatcaacacct
ttgcaattacaagatctcactcatgggattcaaggaatgctacgaggatttattgatctt
gttttccgctatcaagggaaatattacttattggactataagtccaacaagttagggcat
gattttgttgattatgcgccagagcaacttaaaaaagtcatggtggagcagcattatgat
tggcaatatttgttttatacagtagctcttcaccgttatttaacacaacgagatcaaaat
tatcactatgagagagattttggtggtgtgatttatacttttttacgaggcatgaatgga
aaagataattatggtatatattttaacaagcctaatgcggatctcattgcagagttagag
gagttactgtaa
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integrated database retrieval system
