Parageobacillus caldoxylosilyticus: BV455_02780
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Entry
BV455_02780 CDS
T07489
Symbol
recD2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pcal
Parageobacillus caldoxylosilyticus
Pathway
pcal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BV455_02780 (recD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcal03400
]
BV455_02780 (recD2)
Enzymes [BR:
pcal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BV455_02780 (recD2)
DNA repair and recombination proteins [BR:
pcal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BV455_02780 (recD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
AAA_22
AAA_16
UvrD-helicase
UvrD_C
AAA_12
T2SSE
AAA_28
AAA
NTPase_1
TsaE
nSTAND3
DUF4926
AAA_17
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QXJ39414
LinkDB
All DBs
Position
2704165..2706519
Genome browser
AA seq
784 aa
AA seq
DB search
MRQQESFALDEASFIKGTCVATIFHNEENFYSVIRVRVEETNEACEEQEVVVTGYFPKMN
EQDTYIFYGKFHNHPRFGRQYVVEHFRKQFPNTKEGLIHYLASDLFKGIGKKTATAIVET
LGENAISKILEDPSVLDGVPKLTKQKAKELYETLRTHEGLEQTMIALSQFGFGPQLAMKI
YQAYQEETLSIIQQNPYQLVEDVEGIGFGRADELGYQLGISGSHPARIRAACLFALEQDC
LQEGHVYITKDQLTAHVKQLLEAKRSETIRAETIEQMLVMLAEEGKLIEEEERFYIPSLY
FAEKGIVTNVKRLLQQTEAVMTFPESEFLLALGRLEERLSVQYAPLQKEAIRQALSSSLF
ILTGGPGTGKTTVIKGIVEIFADLHGLSLDPKDYTKDRPFPILLAAPTGRAAKRMSEATG
LPAVTIHRLLGWNGAEGFTHDEDEPISGRLLIVDEMSMVDTWLANQLFKSIPDGMQVILV
GDEDQLPSVGPGQVLKDLLRAGVVPTVRLTEVYRQAEGSSIIELAHQMKNGLVPSDLTAQ
KADRSFIRCQTGQVAEVVRQIADNARKKGFAVKDIQVLAPMYRGPAGIDRMNQVLQELFN
PKSEKKRELSVGDVVYRVGDKVLQLVNQPEDNVFNGDIGEIVAIFYAKENTEKQDLVVVS
FDGIEVTYSRQDLSQITHAYCCSIHKAQGSEFPIVILPVVKSYYRMLKRNLLYTAVTRSK
QFLILCGEEEAFRLGVARSDDGTRQTTLAEKLQRFLAPFTEGELPMEDANIGMENVSPYD
FMSS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccaacaggaatcgtttgcattagacgaagcgtcgtttattaaaggaacatgtgtt
gctactattttccataacgaggaaaatttttattccgtcatccgcgtccgtgtggaagaa
acgaatgaagcatgtgaagaacaagaagtagtagtgaccggatattttccgaaaatgaac
gaacaggatacgtatattttttatgggaaatttcacaaccatccgagatttggccggcag
tacgtagtcgaacattttcgcaaacagttcccgaatacgaaagagggactcattcattat
ttagcgagcgatttatttaaaggaatcggaaaaaaaacggcaacggccatcgtcgaaacg
ctcggggaaaatgccatttctaaaattttagaggatccaagcgtattagatggcgttccg
aaattaacgaagcaaaaggcgaaagaattgtatgaaacgctgcgcacccacgaaggatta
gagcaaacgatgatcgccctttcacagtttgggtttgggccgcagttagcgatgaaaatt
tatcaagcatatcaagaagaaacgctttccattattcagcaaaacccataccagcttgtt
gaagatgttgaaggaattggatttggccgtgctgatgaattgggatatcagcttggcatt
tcgggaagccacccagcgcggattcgcgccgcctgtttatttgcgctggaacaggattgc
ctacaagagggacatgtatatataacgaaagaccaactgacagcacatgtgaagcagctt
ttagaagcaaagcgcagtgaaacaatccgcgccgaaacgattgagcaaatgttggtcatg
cttgccgaggaaggcaaactcattgaggaggaggaaaggttttacattccgtcactttat
tttgccgaaaaaggaattgtgacaaatgtaaaacgcttgctgcagcaaacggaagcggtc
atgacgtttccagaatcggaatttttactggcgctcggcagattggaggagcgtttgtct
gtacaatacgctccgctgcaaaaagaagcgattcgccaggcgctttcctcttcgcttttt
attttaaccggcgggcccgggacggggaaaacgacggtcattaaagggatcgtggaaata
tttgctgatttgcatggcctttcccttgatccgaaagactatacgaaagaccgtccgttt
ccgattttgcttgccgcaccaacgggaagagcggcaaagcgaatgagcgaggcgaccggg
cttcccgctgtaacgattcaccggctgcttggctggaacggagcggaaggttttacgcat
gacgaggatgaaccgattagcggcaggcttttaattgttgatgaaatgtcaatggtcgat
acgtggctggcgaatcagctgtttaaatcgattcctgacggcatgcaggtgattcttgtt
ggcgatgaagaccagcttccatcagttgggccgggacaagtgttaaaggatttgctgagg
gcaggagtggtgccgaccgttcgcctgaccgaagtgtaccggcaggcggaaggatcatcg
attattgaattggcccaccagatgaaaaacggcctcgttccttccgatttaacggcccaa
aaagcggatcgctcctttatccgttgccagacaggacaagtagccgaagtagtgcggcaa
attgccgataatgcgcgcaaaaaaggctttgctgtaaaagatattcaagtgctcgcccca
atgtaccgcggacctgccggaattgaccggatgaatcaagtgctgcaagaattatttaat
ccaaagtctgaaaaaaagcgggagctttctgtcggagatgtcgtgtacagggtcggcgac
aaagtgctgcagcttgtcaatcagccggaagataacgtgtttaacggagatattggtgaa
attgtcgccattttttacgcgaaagaaaatacggaaaagcaggatttggtcgttgtttcg
tttgatggcatcgaggtcacgtattcgcggcaagacttgtcgcaaattacccatgcctat
tgctgttcaattcataaagcgcaaggaagcgaatttccaattgttattttgccggttgtc
aaaagttattaccgcatgctgaagcggaatttgctatataccgccgtgacaagaagcaaa
cagtttttaattttatgcggggaggaagaggcgtttcggctcggagtcgcccgcagcgat
gatgggacgcggcagacgacgttggcggagaaattgcagcggtttctcgcgccatttacc
gaaggagagctgccgatggaagatgcgaacatagggatggaaaacgtttcaccgtatgat
tttatgagcagctag
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