Pseudomonas campi: HNE05_11890
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Entry
HNE05_11890 CDS
T07561
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pcam
Pseudomonas campi
Pathway
pcam00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HNE05_11890 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcam01007
]
HNE05_11890 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcam03016
]
HNE05_11890 (aspS)
03029 Mitochondrial biogenesis [BR:
pcam03029
]
HNE05_11890 (aspS)
Enzymes [BR:
pcam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HNE05_11890 (aspS)
Amino acid related enzymes [BR:
pcam01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HNE05_11890 (aspS)
Transfer RNA biogenesis [BR:
pcam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HNE05_11890 (aspS)
Prokaryotic type
Other AARSs
HNE05_11890 (aspS)
Mitochondrial biogenesis [BR:
pcam03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HNE05_11890 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QKE64020
UniProt:
A0A6M8FJB1
LinkDB
All DBs
Position
complement(3073452..3075227)
Genome browser
AA seq
591 aa
AA seq
DB search
MMRSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAK
ADRVRSEYVVKITGKVRLRPEGARNANMASGAIEVLGYELEVLNEAETPPFPLNEYTDVG
EETRLRYRFIDLRRPEMAEKLKLRSRITSSIRRYLDENGFLDVETPILTRATPEGARDYL
VPSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETS
FLDEKDIMGITETMIRNLFKEVLDVEFGELPHMTLAEAMRRFGSDKPDLRIPLELVDVED
QLKDVDFKVFAGPANDPKCRVTALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNER
AQGVEGLQSPIVKNIPLDNINVILDRVGAVDGDIVFFGADKAKIVSEALGALRIKLGHDL
NLLTCEWAPLWVVDFPMFEENDDGSLTAMHHPFTAPSCSPQELEANPATALSRAYDMVLN
GTELGGGSIRIHDKAMQQTVFRVLGISEEEQQEKFGFLLDALKFGAPPHGGLAFGLDRLV
MLMTGASSIREVIAFPKTQSAACVMTQAPGLVDNKALRELHIRLREQAKAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcagccactattgcggccagttgaacgagagcctggacggtcaggaaatcacc
ctttgcggttgggtccatcgtcgtcgtgaccacggtggcgtgatcttcctcgatatccgt
gaccgtgaaggtctggcccaggtggtgttcgacccggatcgcgccgagaccttcgccaag
gccgaccgcgtgcgcagcgagtacgtggtcaagatcaccggcaaggtacgcctgcgcccc
gaaggcgcgcgtaacgccaacatggcctccggcgccatcgaagtgctgggttacgagctg
gaagtgctcaacgaagcggaaaccccgccgttcccgctcaacgaatacaccgacgttggc
gaagaaacccgcctgcgctaccgcttcatcgacctgcgtcgcccggaaatggccgagaag
ctcaagctgcgttcgcgcatcacctcgagcatccgtcgctacctggacgagaatggcttc
ctcgatgtggaaacgccgatcctcactcgtgccactccggaaggcgcgcgcgactacctg
gtgccgagccgcacccacgccggcagcttcttcgccctgccgcagtcgccgcagctgttc
aagcaactgctgatggtggccggcttcgaccgctactaccagatcgccaagtgcttccgc
gacgaagacctgcgtgccgaccgccagccggaattcacccagatcgacatcgagaccagc
ttcctcgatgaaaaagacatcatgggcatcaccgagaccatgatccgcaacctgttcaaa
gaagtgctggatgtggagttcggcgagctgccgcacatgaccctggccgaggccatgcgt
cgcttcggttcggacaagccggacctgcgcatcccgctggagctggtggatgtggaagac
cagctcaaggacgtcgacttcaaggtgtttgccggtccggccaacgaccccaagtgccgc
gtgactgcgctgcgcgtaccgggtggggcgagcatgccgcgcaagcagatcgacgactac
accaagttcgtcggcatctacggcgccaagggcctggcctacatcaaggtcaacgagcgc
gcgcagggcgtcgaaggcctgcagtcgccgatcgtcaaaaacatcccgctggacaatatc
aacgtgatcctcgatcgcgtcggtgcagttgacggcgacatcgtgttcttcggcgccgac
aaggccaagatcgtcagcgaggcactgggcgcgctgcgcatcaagctcggccatgacctg
aatctgctgacctgcgagtgggcgccgctgtgggtggtcgacttcccgatgttcgaggaa
aacgacgatggcagcctgaccgccatgcaccacccgttcactgcgccgagctgcagcccg
caagagctggaagccaacccggcgaccgcgctgtcgcgtgcctacgacatggtgctcaac
ggcaccgagctgggtggcggttcgatccgtatccacgacaaggccatgcagcagaccgtg
ttccgcgtgctgggcatcagcgaagaagagcagcaggagaaattcggcttcctcctcgat
gcactgaagtttggtgcgccgccccatggtggtctggccttcggtctggatcgcctggtc
atgctgatgaccggcgccagctcgatccgcgaagtgatcgccttcccgaaaacccagagc
gcggcctgcgtcatgacccaggccccgggtctggtcgacaacaaggcgctgcgcgagctg
catattcgtctgcgcgagcaagccaaggccgaataa
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