Phalacrocorax carbo (great cormorant): 104040121
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Entry
104040121 CDS
T08596
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03420
Nucleotide excision repair
pcao04115
p53 signaling pathway
pcao04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104040121 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
104040121 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
104040121 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcao04121
]
104040121 (DDB2)
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104040121 (DDB2)
Ubiquitin system [BR:
pcao04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
104040121 (DDB2)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104040121 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
104040121
NCBI-ProteinID:
XP_009505717
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAPVNHPKDKKHESAHERWPEEGKSAGKRKWDYEELGNEPQAKRLFVRKTSKPPEKIGWS
GGGSMVRNNRALFRQLERQCSIVHYVYQNMLGGSIRAQLRQCLQLPFLRSLASYRLFRTA
SPFDRRVTCLEWHPTHPSTVAVGSKGGDIILWDYEVLTKTCFIKGKGPGDSLGDFKFSPY
EAAKLYVASGDGTLSLQDLEGRAVQVISRAPDCGHEHHNVCCWYCSVDVSASCRAVVTGD
NIGNVVLLSTSGEEIWKLKLHRKKVTHVEFNSRCEWLLATASVDQTVKIWDLRNIKNKMN
FLHVLPHDKPVNAAYFSPTDGAKLLSTDQRSEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVAGRYPDPKFPGYTVNELRTVDVFDGNTGEMVCQLHDPNASGIVSLNK
FNPMGDTLASGMGFNILIWSREEMVAKKQEHLLKAMTEQGIGSWSLSRRGGQRQANPGTS
KLKANLLSWELEEMRMKNNNSKSQGRKRKGKDLDN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccatccaaaggacaagaagcatgagagcgcacatgagcgttggcca
gaagagggaaaatcagctgggaagaggaaatgggactacgaggaactagggaacgagcca
caagcaaagaggttgtttgtgagaaaaacatccaaaccccccgagaaaatcggttggagt
ggaggcgggtccatggtgagaaacaacagagcccttttccgtcagctggagcggcagtgc
agcattgttcattatgtctaccagaacatgctgggaggctccattcgtgcccagctcagg
cagtgtctgcagctgccctttctgcgttctcttgcctcataccgcctctttcgaacagca
agtccctttgacaggagagtgacatgcctggaatggcatccaacacaccccagtactgta
gctgttggttccaaaggtggagacatcatcctttgggactatgaagtacttactaaaacc
tgcttcataaaagggaaagggccaggagattctcttggagacttcaagttcagtccttat
gaggcagcgaagctttatgtggcatcaggggatggcaccctaagtctgcaggaccttgag
ggcagagcagtgcaggtgatctcccgtgccccggactgtggccatgagcaccataacgtt
tgttgctggtactgcagcgttgatgtttctgcaagctgccgtgcagtcgtgacaggtgat
aatataggcaacgtggtcctgctcagcacttcaggtgaagagatttggaagctgaaattg
cacaggaagaaagtgactcatgtggaatttaactcccgatgtgagtggttgctggccaca
gcgtctgtggatcagacagtcaaaatctgggacctcagaaacatcaaaaacaaaatgaat
tttcttcatgtgcttcctcatgacaaacctgttaatgcagcttacttcagcccaacagat
ggtgccaaactcctgagcacagaccagcgcagtgaaataagggtttactcctcttcagac
tggaccaagccacagcatctgatcccacatccacatcggcagtttcagcacctcacacct
attaaggcaacatggcacccgcgctatgacctcatcgtagcaggtcgctacccagaccct
aagttcccaggatacacagtgaatgagctacgaactgttgatgtattcgatggaaacacc
ggagagatggtttgtcaactccacgatccaaatgcttctggtatcgtctcgctcaataaa
tttaaccctatgggagacacgctggcttctggcatgggctttaatattctgatctggagc
cgtgaggagatggtggccaagaagcaagaacatcttttgaaagccatgacagaacagggg
attggaagctggagtttgtccagacgtggagggcagaggcaggcaaaccctgggacaagc
aaactcaaagctaacttactgtcttgggagctggaggagatgagaatgaaaaacaacaat
tctaaatcacagggaaggaagcgaaaagggaaggatctagataactga
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