Phalacrocorax carbo (great cormorant): 104044669
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Entry
104044669 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 18 protein-like
Organism
pcao
Phalacrocorax carbo (great cormorant)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAHCC1-like_Tudor
BAH
Tudor_3
Motif
Other DBs
NCBI-GeneID:
104044669
NCBI-ProteinID:
XP_009502829
LinkDB
All DBs
Position
Unknown
AA seq
1844 aa
AA seq
DB search
PSSPPPASPPPAPAIPPKEEVPETVEKKDLELEKEAAGPYQALFPEIPPGYPFQSLPPSF
GRHYPYLLQPTAASDADGLAPDVPLPAEGSEHMELSPEVKPIHLSPSKMLEPIQAAAEEE
SLEERVKSEVQMEESQEGICEQDMGTLNITTSAAVPVQNVDNCNLLLHQGEALGTMEQDQ
EGLQSCPPPYQVVACPAEAEAQAETGSGAETCSVHMDYDGSLVHAENEPPEMDLTPQREE
ASVAMDLQSADVPRGREFPNLPPEEGEQGPEIPSYTEEAISCQMPALDIKPGDPLAGMNA
LVAATEMPQACSLLTTASVTPSQMKVEVLPDQALEHSFLQGITLLSEIAEMELEKRKQEI
QTGPESFPVRPTLESLLAASTHMLMEVLSTPFMESLKTIRLPRELNPNKKYSWMQKKDEP
MYSIKSAIENMDAMELDYRMRLGXARRYKEKQRELVKLQRRRDSEEKHDEKSRSLARRGP
GRPRKRKLGSSALSPIKERGKSDSKSGKLSKSLLLSEDSETGEGMKKRHKGALPEEDEDV
ESSGGKMKGRNQSWEEHDAAPSFSNELKLKKKKVPSDQEQLASKLDKALSLTKQDKLKSP
FKFADSSGGKPKASGGGSRYLPPHEALPSKDEKKSLAKSLGLSLKTTKEGKNKVAAKMKK
MEVGLKVKNQLKVSHSPAISEVSSYSYNTDSEEEEEGSLRDEWPGAAPSAPDSFDQDSSS
EEEEEEDEEEEEEAEDYGTDGTDRLSSPALDESGLGLLARFAASAMPSPIVPPPLSIIQL
EAKQKAKKXXXXXXXLGTEFEYTDSESEIKIRKKSPSGLLRGKKGPLETSSIPPNQAPSS
LDSGSGSADKAKLGSEKGRKLKKFKSPKDLSFEFGLEASDDDLWNRRRSERIFLHDATMS
SAMLTSAAPASSTPVSKPGRCGKGAPMSPKKEGSKGKERKELSKRKKGKETPCCSSSSSM
SPPGIPSSPSDVRVSLANALGSTKKSKAKVKAKEVKKENRGKGGAVSKLMESMAAEEDFE
PNQDSSFSEDENIPLSMLVERPPTPAPRSCIIDKDELKDGLRVLIPMDDKLLYAGHVKTV
HSPDIYRVVVEGERGNRPHIYCLEQLLQEAIIDVKPPSVRFLPEGTRIAAYWSQQYRCLY
PGTVVRGALDLEEDGDLITVEFDDGDTGRIPLSHIRLLPPDYKIQCAEPSPALLVPSTKR
RSRKSSKDTGEGKEGATLGSEEPVSKGKGRGRKPSIKAKAEEAALPEEKDQVESSPVTSS
VPEKPACLGKASMKGSRKSQPLPPGGSPAPTEEKRSKASKMKISTKLHSPPQPTYQPAVF
GSILGTEPYSDLPGTLAAFGSSDASASKAKAKKGRPTEETQEFGTMVKAQRKHDNEILIK
LDHEGVMSPKTKKMKEAMRMLEDSNLASRRDGKSLLGLGYSPAVGAEGKQKSSRAKAAEG
DPSPASFGGKFDGSAESLTASKDQEEKAAAPAAVEESESNSSDSSSESEGEEEAEKNRGE
AQDSSSASSRASTPLSSSNSSSSSSSSSSSSSSSSSSSSSASSTSSSSSSSSSSSSTTDE
DSSCSSDDEVAEAQPSSSVQQTLPPKQTKQAGKSRASSHPQSQKQPAQQPVQQPAPQQSG
NKSRPKKREGIHLPTTKELAKRQRLPSVENRPKIAAFLPARQLWKWFGKPTQRRGMKGKA
RKLFYKAIVRGKEIIRIGDCAVFLSAGRPNLPYIGRIQSMWESWGNNMVVRVKWFYHPEE
TNPGKKLNEGKRWDQKSGRSLSTALQASSQRKDFMERALYQSSHVDENDVQTISHKCLVV
GLDQYEQMLKTKKYQDSEDLYYLAGTYEPTTGMIFNTDGVPVIC
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
ccttccagcccgccccctgcctctccaccccctgcccctgccatccctccaaaggaagag
gtgcccgagaccgtggagaagaaagacctggagctggaaaaagaggctgctggtccatat
caggccttgttcccagagatccccccaggatatccattccagtccctgcctccctccttt
ggaagacactacccctacctcctccagcccactgcagcgtctgatgcagatggcctggct
cctgatgtcccgctgcctgctgaaggctctgagcacatggagctttccccagaggtcaag
cccatccacctgtctccatccaaaatgctagagcctatccaagcagcagcagaagaggag
tccttggaagagagggtgaaatcagaagtgcagatggaggaaagccaagaaggcatctgt
gagcaggacatggggactctgaacatcaccacctctgcagccgtcccagtgcagaatgtg
gacaattgcaatctcctgttgcatcaaggtgaagccctgggtactatggagcaggaccag
gaaggcctccagagctgcccacctccttaccaggttgtggcctgccctgcagaagcagag
gcccaagcagagactgggagtggagcagaaacctgctctgtgcacatggactatgatggt
tcgctcgtgcatgcagagaacgagccacctgagatggacttgacaccccagcgggaggag
gcctctgtagccatggatctgcagagtgccgatgtgccccgggggagggagtttcccaac
ctgccgcctgaagagggggagcaggggccagagatcccttcctacacggaagaggcaatc
tcttgccaaatgccagctctggacatcaagccgggcgatccgctggctgggatgaacgct
ttggtggctgccacagaaatgcctcaggcttgttccttgctgactaccgccagcgtcact
ccgtcgcagatgaaggtggaggtgttacctgaccaggccttggagcactccttcctgcaa
gggatcactttgctgagtgaaattgcagagatggagctggagaaaaggaagcaagaaata
caaacaggtccagagagtttccctgtccggccaacactggagagtttgctggctgccagc
acccacatgctcatggaagtactttccaccccctttatggaaagtctgaaaaccatccgg
ctgcctcgagagctgaatcccaacaaaaagtacagctggatgcagaagaaagatgaaccc
atgtactccatcaaatcggccattgagaacatggatgcaatggagctggactacaggatg
aggctggggngggcgcgccggtacaaggagaagcagcgggagttggtgaagctgcagcgg
cgcagggactccgaggaaaagcatgacgagaaaagtagaagcttggcaagaagaggccct
ggaaggcccaggaagaggaaacttggatcaagcgctctgtcacccattaaggagagaggg
aagagtgacagcaagagtggaaaactgagcaagtccttgttgctctctgaagactctgag
actggggagggcatgaagaagaggcacaaaggggccctcccggaggaggacgaggatgtg
gaaagcagcggtggcaagatgaaaggaaggaaccagagctgggaagagcatgatgcggct
cctagcttctcaaacgagttaaagcttaagaagaagaaggtaccatcggaccaggagcag
ctggccagcaagcttgacaaagccctgtcactcaccaaacaagacaagctcaaatcccct
ttcaagtttgccgacagctctgggggaaagccgaaggctagtggaggtggcagcaggtac
ctcccaccccatgaggctctgccgagcaaggatgagaagaagagtctggccaagagcctg
ggcctgtcactgaaaaccaccaaggaaggtaaaaacaaagtggctgccaaaatgaagaag
atggaggtggggttaaaagtcaaaaatcagctcaaggtttcccattcaccagcaatatct
gaagttagcagctactcctataatacagactcggaggaggaggaggagggatccttgagg
gacgagtggccgggggcggccccctccgcccccgactcgttcgatcaagattctagctcg
gaggaagaggaagaggaggatgaagaggaagaggaggaagcagaggactacgggacagac
ggcactgacaggctttcatcgcctgcccttgacgagagcggcctgggccttctagcaagg
tttgccgccagtgcaatgcccagccccatcgttccccctccgctttccatcatccagctg
gaggccaagcagaaggcaaagaagannnnnnnnnnnnnnnnnnacctagggacagagttt
gaatacaccgactctgagagtgagatcaagattaggaagaaatcaccttcagggctgctg
cggggaaagaaggggccactggagacaagcagcatcccgccaaaccaggccccaagcagc
cttgactctggatctgggagtgctgacaaggccaagcttgggtctgagaaaggccgcaag
ctgaagaaattcaagtcccctaaggacttgagctttgagttcgggctggaggccagtgat
gatgacctgtggaaccggcgccggagtgagcggatcttcctccacgatgccaccatgtcc
tcagccatgctgacctccgcggcgcctgccagctccactcctgtctccaagcctgggcgc
tgtggcaagggggcacccatgagccccaaaaaggagggcagcaaggggaaggagagaaag
gagctaagcaagcggaagaagggtaaagaaacaccctgctgctcctcctcctcgtccatg
tctcctcctggcatccctagctccccatctgatgttcgtgtcagcctggcaaatgccctg
ggctccaccaagaagagcaaagccaaggtgaaggccaaggaggtgaaaaaagagaaccga
gggaagggaggagctgtcagcaagcttatggagagcatggcagcagaggaggattttgaa
cccaaccaagacagcagcttctcagaggatgagaacatcccactgagcatgctggtcgag
agaccacccacgccagctccccgctcctgcataattgacaaggatgagctgaaagatggt
ctgcgtgtcctcatccccatggatgacaagctgctctatgctgggcatgtcaagacagtg
cattcaccagacatataccgtgtggtggtagaaggcgagaggggaaaccgtcctcacatt
tactgcctggagcagctcttgcaggaagcgatcatcgacgtgaaaccaccttcagtgcga
ttcctgcccgagggcacaaggattgcagcctactggagccagcagtatcgctgcctctat
ccagggacagttgtccgaggagccctggatctagaggaagatggtgatctcatcacagta
gagtttgatgacggggacacgggacgtatcccactgtctcacattcggcttcttccacct
gactacaagatccagtgtgctgaaccttccccagcccttttggtgcccagcaccaagcgc
cgtagccgtaaatccagcaaagacacaggagaaggaaaagagggagctacactggggtca
gaggagcctgtgtcaaagggcaaagggcgagggagaaagccaagcatcaaggcgaaagct
gaagaggctgccttgccagaagagaaggatcaggttgaatcttcacctgttacttcttca
gtcccagagaagccagcctgcttgggcaaggcaagcatgaaggggtcacgaaaatcacaa
ccactgccgcctggaggctctcctgcccccacagaggaaaaacggtcaaaagccagcaaa
atgaagatctccactaagctgcatagccccccgcaacccacttaccagcctgctgtgttt
ggcagcatccttggcacagagccctacagcgacctcccggggacactggcagcctttggc
tccagcgatgcttcagcatcgaaagctaaggccaagaaagggcgacccacagaagagacg
caggagtttggcaccatggtcaaggctcagaggaagcatgacaacgaaatcctgatcaag
ctggaccatgagggtgtgatgtctccaaagacaaagaagatgaaggaggcgatgaggatg
ctggaggactcgaacctggccagtcgcagagatggcaagagtctcttggggctaggctat
tcccctgcagtgggtgcggagggcaagcagaaatcttcccgagccaaagcagctgaggga
gacccttcccctgccagctttggaggaaagttcgatggctcagcggagagcctcactgct
tcgaaggaccaggaagaaaaggcagcagctccagcagctgtggaggagtctgagagcaac
agcagtgacagcagctcagagtcagagggagaagaggaggctgagaagaaccgaggggaa
gcccaggacagcagctcagccagctcaagagcatccacccctctctcttcctccaactcc
tcctcttcctcctcttctagcagcagctcctcttcatcctcctcttcctcctcttcttca
gcctcatcgacctcttcctcatcgagctccagctcttcttcatcctccactacggatgaa
gactcctcctgtagctctgatgacgaagtggctgaggcccagccaagttcctcggtgcag
caaaccctcccacccaagcaaaccaagcaggcagggaaatcccgtgcgtcctcccacccc
cagagccagaaacagccggcgcagcagccggtgcaacagccggccccacagcagagcggc
aacaagagcaggcccaaaaagcgcgagggcatccacctgcccaccaccaaggagctggcc
aagcgccagcgactgccatcggtggagaacaggcccaagattgctgctttcctccccgca
cggcagctgtggaagtggtttgggaaacccacacagagacgaggaatgaaagggaaggcc
agaaagctgttctataaggccatcgtccggggcaaggagataatccgcatcggagactgt
gcggtcttcctctcagccggccgccccaacttgccctacatcggccggatacagagcatg
tgggagtcgtgggggaacaacatggtggtccgagtcaaatggttttatcatccagaagaa
accaaccctgggaagaaactcaacgaaggcaagcgctgggatcagaaatcaggcaggagt
ctgtccacagctttgcaggcatccagccagaggaaggacttcatggagcgagccctctac
cagtcctctcatgtggatgaaaatgatgttcagaccatctcacacaagtgtcttgttgtt
ggtctggatcaatatgagcagatgctaaagacgaagaaataccaagacagtgaggacctc
tactaccttgcggggacctatgagcccactacgggcatgatcttcaacaccgatggggtc
cctgtcatctgctga
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integrated database retrieval system
