Phalacrocorax carbo (great cormorant): 104046246
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Entry
104046246 CDS
T08596
Symbol
SETD1B
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao00310
Lysine degradation
pcao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104046246 (SETD1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104046246 (SETD1B)
Enzymes [BR:
pcao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
104046246 (SETD1B)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104046246 (SETD1B)
HMT complexes
COMPASS/SET1 complex
104046246 (SETD1B)
COMPASS/SET1 complex (yeast)
104046246 (SETD1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
104046246
NCBI-ProteinID:
XP_009504656
LinkDB
All DBs
Position
Unknown
AA seq
1920 aa
AA seq
DB search
NSGIAPVDCVRDPRIGRIWTKTKELELSVPKFKIDEFYVGPVPPKQVTFAKLNDNIRENF
LTDMCKKYGEVEEVEILYNPKNKKHLGIAKVIFATVKGAREAVQHLHNTSVMGNIIHVEL
DTKGETRMRFYELLVNGLYTPQTLPVGTEQDVSPTVNEALQLTDSLKRLKDSNLSSAGSS
VTPNSSTPFSHDTAYSSCRQDTPNSYSQFTPQSQGTPHTPRLGTPFSQDSTYSSRQTTPV
YHFGQDSGYKPRRHDTKFTDAYNRRPGHHYVHNSAGVYRGTEHQFSTYKSHQQEPVQFSH
TPPLSHSSSSSYKSAFSPYQAPAVFPQSDEQQFPQTSRETEYRRPAPPPTEMVVESSTAT
NMDFVPVKEKQEELPPLPDSNSVPEPSTASFSQTPERSETPGTPTMESEMQHNSLDSRIE
MLLKEQRTKLPFLNEHDSDNEIRMEGSPISSSSSQLSPIPMYGSNSQPGYRGQTPSSRPS
STGLEDISPTPLPDSDDDEPIPGTASLSQNSRGTSEASMTPIDQLSRTSKTETSEAKEMV
PGDQTPTSEKMDEGQHSSGEDMEISDDETNPAPITSAECAKTIVVNSSVSNTAVMAPSIP
PMPPPGFPPLPPPPPPQPGFPMPPPLPPPPPPTHPAVTVPPXXXXXGVPPPHILPPLPPF
HPGMFPVMQVDMISVLGNQWGGMPMSFQMQTQMLSRMMQAQNTYQYPPFMTGRMQFVNLP
PYRPFSMGAALGRGQQWPPLPKFDPSVPPPGYEPKKEDPHKATVDGVLLVIVKELKAIMK
RDLNRKMVEVVAFRAFDDWWDKKERLAKASLTPVKSGGELEEKPKPKDRITSCLLENWNK
GEGLGYEGIGLGIGLRGAIRLPSFKVKRKEPPEAASAGDQKRIRPSTSVDDEDEESERDR
DASDITSDLSKKDAEAVGLRRRPARPLELDSEGEEGDETSGXXXXXEQEEGGGLVKAAPS
KEDEEEDEDDDEDEDEDEDDEDEDDEEEETGIDTSDKEEEEQDSEEDVASPSSSKAEVES
SDESEDSSEFESSSDSDDEDEDDDDEDEEEEEEGMAEDQDRETMVAETEHEPAGHELPDD
ERETILELYPVEDYMDATGLGLAEQTLAVKDEGMEEIKAGEGECGEVPEASIAAETLKHL
VMERDQETKLALSPICRPEEESEPTTMLEPEIQEGPKPESQDEEEALCLSTPVGVFGEPL
PNKSSFFSKSDDSSLEVRVKTKLPSAAEEDDRLPRTPGREVMIHSETDTLLLPAHKVPSS
MIPLPSTPGKEESLVPPEKFPEQLMVTKTSVEEEIPRTPGRDILAKHSHPLAKSQSTDTV
PATPGSDAPLTGSSLTLSSPQVPGSPFSYPSQSPGINSGIPRTPGRDFNFTPTFPEAGAT
IPCLLSGKKQSEDELDEKPFKEPLGASLTISMNSVPSPIPFASPPQADFHTDMGLPPDEP
IPVAALPCMHGDGRMPVEECKADVKSVLLSPEVPTGASILPPPPPPSVLPKRRPGRPKRS
PPSVLSLDMYSGKTVEPSPVPVALVESAVGKELLSGHPDAFYGLKDPEAVTLDFRNDGFH
EKIAAETVAEKLPFKELENQWNEDFKEDEAHVKPKRQWRRQKKTPEDLPVIPSPEYSPPR
PQFRPRSEFEEMTILYDIWNGGIDEEDIKFMCITYDRLLQQDNGMDWLNDTLWVFHPSTS
FSTPKKKKRDDGMREHVTGCARSEGYYKIDKKDKLKYLNNSRAFAEEPPADTQGMSIPAQ
PHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFCKSHIHDWGLFAMEP
IAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINH
SCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
aactcgggaattgctcctgtggattgtgtcagggatcccagaatagggcgaatatggacc
aaaactaaggagttggagctgtctgtccccaaattcaagattgatgaattttatgtgggg
ccagtgcctcccaagcaggtcacctttgccaagctgaatgacaacatccgcgaaaacttt
ttgaccgacatgtgcaagaaatacggcgaagtagaagaggtggagattctgtacaacccg
aagaacaagaagcacctgggcatcgccaaagtgatctttgccactgtcaagggtgcccgg
gaggctgtccagcaccttcacaacacctctgtcatgggcaacatcatccatgtggagctg
gatacgaaaggtgaaacccgcatgcgattctatgaactactcgttaatggtctttacact
cctcagacccttcctgtaggcactgaacaggatgtatcgccaactgtgaatgaagctctc
cagttgacagattccctgaagcgcctgaaagacagtaacctttcttctgccggatcatct
gttaccccgaacagtagcacaccattttcccatgacacagcctattccagctgtcggcaa
gacaccccaaactcgtacagccaatttaccccacagtcccaaggaacaccacacacccca
cggttagggacaccgttttcccaggattccacctattccagtcgtcagacaacacctgtg
taccattttgggcaggacagtgggtacaaacccaggagacacgacacaaaatttacagat
gcctacaaccgtcgaccgggacatcactatgttcataattcggcaggtgtttaccgaggg
acggagcatcagtttagtacgtacaaatcccatcagcaggagccagttcagttctctcac
actcctcccctgagccactctagttcttcgagctacaaatctgccttctctccctaccaa
gcaccagctgtatttccccaatctgatgagcagcagtttccccaaacttccagggaaaca
gagtaccgaagacccgcgccacctcccactgagatggttgtggaaagcagcactgccact
aacatggattttgtcccagtgaaggagaaacaggaggagcttccgcccttgcccgattcg
aactctgttcctgaaccgagtacagcatccttctctcagactccagagagaagtgagacc
cccggcacccccaccatggagtcagaaatgcagcataacagtttagactcaaggattgag
atgctcttaaaagagcagagaacaaagttaccctttcttaatgagcatgactcggataat
gagatccgaatggaaggcagccctatctcctcctcttcttcccagctctctcccatccct
atgtacggttcaaactctcagcctggttacagaggtcagacgccttcctcgcgcccttcc
agcacaggcttggaggacattagcccaacaccgttacccgactctgatgatgatgagccc
atccctgggacggcttctctgagtcagaattcccgggggacgtcggaggccagcatgact
cccattgatcagttgagcaggacctccaaaaccgagacgtcagaggctaaagaaatggtg
cctggtgaccagactccaacatcagaaaaaatggacgagggtcagcattcttcaggggag
gacatggaaatctctgatgacgagaccaaccctgcacccatcactagtgcggaatgtgcc
aaaaccattgtggtgaactcctctgtcagcaacacagctgtgatggccccatcgattccc
cccatgccaccaccaggattccctcctcttcctcctccgccacctccacagccaggcttc
ccaatgcctccgccgctacctccgccacctccgccgactcaccctgccgtcactgtcccc
ccnnnnnnnnnnnnnnnnggggtccctccgcctcatatcttgcctccacttcctccgttc
catcctggcatgttccctgtcatgcaagtggatatgataagtgtcttgggcaaccagtgg
ggtggcatgcccatgtctttccagatgcaaactcagatgctgagccgcatgatgcaggca
caaaacacataccagtatccgcctttcatgacgggccggatgcagtttgtgaatcttccg
ccctaccgccctttctcaatgggagcagctcttggtcgtggacaacagtggccaccactg
cccaaatttgacccctcggttccaccaccgggttacgagccgaagaaggaagatccccac
aaagccactgtggatggagtcctcctggtcatagtgaaggaactaaaggctatcatgaaa
agggacctgaaccggaagatggttgaagtggtagcatttcgggcatttgatgactggtgg
gacaagaaggaacgtctggcaaaggcgtctctcactccagtgaagtctggaggagaactg
gaggaaaaaccaaagccaaaagatcgaatcacatcttgtcttttggagaactggaacaaa
ggagaaggcctgggatatgagggaatcggcttgggcattgggttacgaggggccatccgg
ttgccatccttcaaggtgaaaagaaaggagccacctgaagctgcctcagcaggagatcag
aagagaatccggccttctacttctgtggatgatgaagatgaagagtcggagagggacagg
gatgcttccgatataacatctgacctgtcaaagaaggatgcagaagcagtggggctgagg
cggcgaccagcgaggccactggagcttgacagtgagggagaagagggagatgagacatca
ggnnnnnnnnnnnnnnnngagcaggaagaaggaggaggtttggtgaaagcagcaccgagc
aaggaagacgaggaggaagatgaagatgatgacgaggatgaagatgaggatgaagatgat
gaggatgaagatgatgaggaagaggagacaggcatagacacaagtgacaaggaggaggag
gagcaggactccgaggaggatgtagcaagtccctcatcttctaaggctgaagttgaatca
tctgatgaaagtgaggactcctctgaattcgagtcgagttcagactcagatgatgaagat
gaggatgatgatgatgaagatgaggaggaagaggaggaggggatggctgaagatcaagac
agagaaaccatggttgctgagacagagcacgaacctgctggtcatgagcttcctgatgat
gagagggagactattttggagctgtatcctgtggaggactacatggatgcaacgggcttg
ggactcgcagagcaaactttggcagtgaaagatgaaggcatggaagaaatcaaggcaggg
gaaggtgaatgtggtgaagtcccagaggcatctattgctgctgaaacactgaaacacttg
gttatggagagagaccaggagacaaagcttgcactgtctcccatctgtagaccagaggaa
gagtccgaacccactaccatgctggagccagaaatacaggaaggtccaaagcctgaatct
caagatgaggaggaggcgctctgtctctcaactccagtgggagtctttggagaacctctg
cccaataaaagcagcttctttagcaagtctgatgacagcagcttagaagttcgtgttaaa
acaaaactgccctcggcagcagaggaggatgaccggctgcctcgcacgcctggacgggag
gtgatgatccattcagagactgatactcttttgcttccagcccacaaggtgccatcctcc
atgattccattaccatcgactcctggtaaagaagaatctttagtccctccagaaaagttc
cctgaacaattaatggtgaccaaaacgtctgtggaagaggagattcctcggactcctggg
cgggacattttggccaagcattcacacccccttgcgaagtcacagagtacggacactgtt
ccagccacaccaggaagtgatgctccccttacgggaagcagcttgacccttagttcccct
caagtcccagggagccccttttcctacccatcccaatctcctggcattaacagtggcatt
cctcggactcctgggagagatttcaatttcacgcctactttcccagaggctggtgctacc
attccttgccttctgtctggcaagaaacagtcagaggatgagctagacgagaaacccttt
aaagagcctcttggtgcttcccttacaatcagcatgaacagtgttccttcccctatccct
tttgccagccccccacaagcagatttccacacagacatgggtttgccacctgatgaacca
atacctgtagcagccctgccatgcatgcacggagatggaagaatgcccgttgaggaatgt
aaggcagatgtaaaatctgttttgctctctccagaagtacccactggtgcttctattctt
cccccaccaccaccaccgtctgttcttcccaaaaggaggccaggtcgaccaaaacggtca
ccaccttctgtcctctcgttggatatgtactcgggcaaaaccgtagaaccttctcctgtg
ccagtggccttggtggaaagtgctgtgggcaaagagctgttgagtggacatcctgatgct
ttctatggactgaaagacccagaagctgtcaccctggacttcaggaatgatggtttccac
gagaaaatagcagctgagacagttgcagagaaactgccatttaaggaactggagaaccag
tggaatgaagactttaaggaagacgaagctcatgtaaaacctaaaagacagtggcgaaga
cagaagaagacacctgaggacctcccagtgattccttcccctgagtattccccaccccgg
cctcagttcaggccacgctctgagtttgaggagatgaccattttgtatgatatttggaac
ggaggcatagatgaggaagatatcaaattcatgtgtatcacatatgaccgcttgttacag
caggacaatggtatggactggctgaatgacaccctgtgggtattccatccttctactagc
ttttctacccccaagaaaaagaagcgggatgatgggatgcgggagcatgtgacgggctgt
gcacgaagtgaaggctattacaaaattgataagaaggacaaacttaaatacctcaacaat
agccgagcttttgcggaggagcctccagctgacacgcagggtatgagcatccctgcccaa
cctcatgcttccacccgggctggctccgagaggcggtcagagcaacgcaggctcctctcc
tccttcactggtagctgtgacagtgacctgctcaagttcaaccagctcaagttccggaag
aaaaaactaaaattctgcaagagccacattcatgactggggcctttttgctatggagcct
attgcagctgatgagatggtgattgaatacgtgggtcagaacatcaggcaggtcattgct
gatatgcgtgaaaagcgatatgaggatgaaggcatcggaagcagttacatgttcagagtt
gatcatgacaccatcattgatgccacaaaatgcgggaacttcgccaggtttattaatcac
agctgcaatccaaattgttatgctaaagtgatcacggtggagtctcaaaagaagattgtc
atctactccaaacagcacatcaatgtgaatgaggaaattacctatgactacaagtttcca
attgaggatgtaaaaatcccatgtctatgtggctctgagaactgcaggggaaccctgaac
tga
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integrated database retrieval system
