Phalacrocorax carbo (great cormorant): 104051547
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Entry
104051547 CDS
T08596
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104051547
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcao01001
]
104051547
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104051547
03036 Chromosome and associated proteins [BR:
pcao03036
]
104051547
Enzymes [BR:
pcao01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
104051547
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104051547
Protein kinases [BR:
pcao01001
]
Serine/threonine kinases: Other
TAF1 family
104051547
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104051547
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
104051547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
zf-CCHC_6
Cac1_C
Ribosomal_L44
zinc_ribbon_12
Motif
Other DBs
NCBI-GeneID:
104051547
NCBI-ProteinID:
XP_009510924
LinkDB
All DBs
Position
Unknown
AA seq
1850 aa
AA seq
DB search
MGSLQLVRRPDEDEDDYDADCEDIDSKLMPPPPPPPVPGKKEDEKDAAATVSEDGDGIIL
PSIIAPSSAASDKVDFSSSSDSESEMGPQEARQAESKEGKLTLPLAGIMQRDATKQLPSV
TELFPEFRPGKVLRFLRLFGPGKNVPSVWRSARRKRKKKHRELAQEVHIQEGEVVTESGM
EGKSPWEYEFAAPPPPEQCLSDDEITMMAPVESKFSQSAGDIDKVTDTKPKVAEWRYGPA
QLWYDMLGIPEDGSGFDYGFKLKEKKEQEVKERTDEGDAALMDEKDDLLADEHFLMVTQL
QWEDDVIWNGEDVKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNPPLPLA
QKTNVAGVLGIAKGKEKQVPEQQVSLDEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAME
TYLNPPVLTLDPNDENIILEIPDEKEEMTSNSPSKENKKESSLKKSRILLGKTGVIKEEP
QQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKL
RQFHRPPLKKYSFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLT
GKDGDLILAEYSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLG
SLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYVRELVDIFVVGQECPLYEVP
GPNSKRANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADF
KRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPE
EENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKP
TQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTM
STEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSA
EDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGEDSGNDKERGKKDRRDK
KALSSASGASANSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVI
DAYCRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKP
KKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHND
NEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPH
KSIHRRRTDPMVTLSSILEGIINDIRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTLR
ENVRKRQYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARL
EKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLE
TIRKNISKHKYQNRETFLDDVNLILANSIKYNGPDSQYTKTAQEIVNICYQTLAEYDEHL
TQLERDISTAKEAALEEADLESLDPMTPGPYTPQPPDLYDTNTSLSMSHDASVYQDESNF
SAMDTPITTPEKRGSQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDADGDLAD
EEEGSAQQPQASVLYEDLLMSDGEDDDDGSDEEGDNPFSSIQLSESGSDSDVEPNAVRPK
QPHVLQENTRMDMDNEESMMSYEGDGGETSQVMEDSNISYGSYEEPDPKSNTRDTSFSSI
GGYEISEEEEEEEQQRCGPSVLSQVHLSEDEEDSEDFHSIAGDSDMDSDE
NT seq
5553 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcctacagctagttcgaagaccagatgaagacgaggatgattatgatgctgac
tgtgaagatattgattccaagttgatgccaccaccaccacctcctccggtacctggaaag
aaagaagatgaaaaggatgcagctgccactgtatctgaagatggagacggtatcattttg
ccctccatcattgctccttcctctgctgcctccgacaaggtggatttcagcagcagctct
gattctgagtcagagatgggacctcaagaagccaggcaggcagaatccaaggaaggcaaa
ctcacacttcctcttgcaggaatcatgcagcgagatgctaccaaacagttgccaagtgtt
acagagctcttcccggaatttcgaccaggcaaggtgctgcgtttcctgcgtctctttggc
cctggaaagaacgttccatcggtttggcgtagtgcacgaaggaaacgcaagaagaagcat
cgggagttggcacaagaagtgcacatacaggagggtgaagttgtaactgagagtggaatg
gaaggaaaatctccttgggaatatgagtttgctgctcctccccctccagagcagtgcctt
tcagatgatgagattaccatgatggcacccgtggaatcaaaattttcccagtcagctggt
gatatagacaaagtgacagacacaaagcctaaagtggcagaatggcgctatggcccagca
cagctctggtatgatatgctggggatccctgaagatggcagtggatttgattatggtttc
aagctgaaagagaagaaggagcaggaggttaaagaacgcactgatgaaggggatgcagcg
ttgatggatgagaaggatgacctgctagctgatgagcacttccttatggtgacacagctc
caatgggaggatgacgttatctggaatggagaagatgtcaagcacaaagggactaagaca
cagcgggcaagtttagctggctggctgccatccagcatgactagaaatgccactgcctac
aatgcccaacaaggtttgaaccgcagtggctctttgcttaatccaccgcttccactagca
cagaaaacaaatgtagcaggagtcctaggtatagcaaagggcaaagaaaagcaggtcccc
gaacagcaagtttccctggatgaagacaagccctggtactccattttcccaattgataat
gaagagttggtatatggccgttgggaagacaatatcatctgggatgatcaggcaatggaa
acctacttgaatccccctgtcttaacacttgatccaaatgatgaaaacataattctagaa
attcctgatgaaaaggaagaaatgacttcgaactctccatccaaggagaacaagaaagaa
tcttcactaaagaagagtcgaatcctgttgggaaaaacaggtgtcatcaaggaagaacca
cagcagaacatgtctcagccagaggtgaaggatccctggaacctctccaatgatgagttt
tactaccccaaacagcagggacttcgaggaacctttggaggcaacatcattcagcactct
atcccagcagtggaacttcgccagccattctttcccacccatatgggtcctatgaagctc
cgacaatttcatcggcctcccctgaagaaatactcttttggtgccttgtcccaaccaggg
cctcatgctgtgcaacctctgctgaagcacataaaaaagaaagccaagatgagagagcag
gagcgtcaggcttctggtgggggtgaaatgttcttcatgcgcacaccacaggacctaact
ggcaaggatggagatctcatcctcgctgaatacagtgaggaaaatgctcctttaatgatg
caggttggcatggcaacgaagattaaaaattactacaaaaggaaacctggcaaagatccg
ggagctccagactgtaaatacggagagactgtttattgtcacacttctccgttcctgggt
tctctgcatccaggccagttactgcaggcatttgaaaacaaccttttccgggcccctatc
tatctacataagatgcctgaaacagatttcctgattatccggacacgacaaggctattat
gttcgagaattagtggatatttttgtagttggtcaggagtgcccgctttatgaagtacct
ggtcccaactctaaacgagctaacacccatatcagagattttctgcaggtttttatttat
cgtcttttctggaaaagcagagaccgtcctcggagaattcgaatggaggatatcaagaag
gcctttccctcacactcagagagtagcattcgaaagcggctaaagctttgtgctgatttc
aaacgcacaggcatggactcaaattggtgggttttaaagccagatttcagattgccaacg
gaggaagagatcagagcaatggtatccccagaacagtgctgtgcttattacagcatgatt
gccgctgagcagcgactgaaggatgcaggttatggggagaaatccttctttgcaccagaa
gaggagaatgaagaggatttccaaatgaagattgatgatgaggtgcgcacagctccatgg
aacaccacacgagctttcattgctgctatgaagggcaagtgccttctagaagtgactggt
gtggcagatcctactggttgtggtgaaggattttcttatgtgaagattccaaacaaacca
actcagcagaaggatgataaagaacctcagccagtgaaaaagacagtgactgggacagat
gctgatctccgccgcctttctctcaaaaatgccaaacagcttctgcgtaaatttggagtt
cctgaagaggagataaagaagctgtctcggtgggaagtgattgatgtggtacgtacgatg
tctacagagcaggctcgttcaggggaaggtcctatgagcaaatttgcacgtggatctcgg
ttttctgtagcagaacatcaggagagatataaagaagagtgtcagcgcatctttgattta
caaaataaggttttggagtccactgagatactgtcaacagacacagatagtagctcagct
gaagacagtgactttgaagagatgggaaagaatattgagaacatgttacagaacaagaaa
actagttctcagctctctcgggaaagagaagagcaggaacgaaaggaattgcaaaggatg
cttctgggagaagacagtggcaatgacaaagagaggggcaaaaaggacaggagagacaaa
aaggcgctgtcatcagcttcaggagcctcagcaaactctcacaaagatgatgacactgcc
tctgtaactagccttaactcctctgccactggccgccgcctcaaaatctatcgcacgttt
agagatgaggatgggaaagaatatgtgaggtgtgagacagttcggaagcctgctgttatt
gatgcctactgccgaatacggactaccaaggatgaagagttcatacgaaagtttgctctg
tttgacgaacagcaccgtgaggaaatgcggaaggagcggcgcaggatccaggaacaatta
cggcgtttaaaacggaaccaagaaaaagagaaactcaagggccctccagagaagaagccc
aagaaaatgaaagagcgtccagacttgaaactaaaatgtggagcatgtggtgcaattggc
catatgaggactaataaattctgccctctttactaccaaacaaatgccccaccttctaat
cctgttgcaatgacagaggagcaggaggaagagctggaaaagacagtcattcataatgat
aatgaagaacttatcaaagtagaagggacaaaaattgtcctgggaaagcaactgattgag
agtgcggatgaagttcgcaggaaatcactggtcctgaagtttcctaaacagcagctgcct
ccaaagaagaagcggcgagtagggacaaccgttcactgtgattatctgaatcgtcctcat
aaatctatccaccgacggcgaacagatcccatggtgacactgtcatccatcttggagggc
atcatcaatgacataagggatcttcctaatacatacccctttcatacacctgtaaatcca
aaagtcgtcaaagattattataagattattactcggcccatggatttacagaccctgcgt
gaaaatgttcgtaagcggcagtacccatcccgagaagagttcagagaacatttggaacta
attgttaagaacagtgcaacatacaatgggccaaagcactcactgacacagatatctcag
tccatgctggacctgtgtgatgaaaagctaaaagagaaggaagataaactggctcgatta
gaaaaagcaattaatcccctcctggatgatgatgatcaagtggccttttccttcattttg
gataacattgtcactcaaaagatgatggcagttccagattcatggccatttcatcatcca
gttaacaaaaagtttgttcctgattattacaaggtgattgctaatccaatggatctggag
actatccgcaagaatatctccaagcacaaataccagaacagagaaacattcctggatgat
gttaacctcattcttgccaacagcattaagtataatgggccagacagtcagtacacaaaa
acagcccaggagattgtgaacatctgttatcaaactttagctgagtatgatgagcacctg
actcaacttgagagagacatttctactgctaaggaagcagcactagaggaggcagatctg
gaaagtcttgatcctatgactcctggtccctacactccacagccacccgatttgtatgat
accaacacttccctcagtatgtcacatgatgcttcagtctatcaagatgagagcaatttt
tctgctatggacactcccatcactaccccagagaagcgaggatctcagatgcgccagggg
cgaggtaggctgggagaggaagactctgacgtagatattgaagggtttgatgaggatgat
gatgggaaacctaagactccagccccagaggttgaagatgcagatggtgaccttgctgat
gaagaagaaggatcagcccagcagccccaggccagtgtcctctatgaagatttgctcatg
tcagatggagaggatgatgatgatgggagtgatgaagagggagataatcctttctcatct
atccaactgagtgagagtggcagtgactcggacgtggaacccaacgcagtgagacctaaa
caacctcatgttcttcaggagaacacacgaatggacatggacaatgaagaaagcatgatg
tcttatgaaggagatggtggggagacatctcaggttatggaggacagtaatatcagttat
ggcagctatgaagaaccagacccaaaatccaacacaagagatactagtttcagcagtatt
ggggggtatgagatctcagaagaggaggaagaggaagaacagcagcgctgcgggccaagt
gtattaagtcaggtccatctgtctgaggatgaggaggacagtgaggactttcattccatt
gcaggagacagtgacatggactcagatgaataa
DBGET
integrated database retrieval system
