Phalacrocorax carbo (great cormorant): 104053203
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Entry
104053203 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03013
Nucleocytoplasmic transport
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104053203
03015 mRNA surveillance pathway
104053203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104053203
03041 Spliceosome [BR:
pcao03041
]
104053203
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104053203
Spliceosome [BR:
pcao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
104053203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
104053203
NCBI-ProteinID:
XP_009512903
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MTFSFLDKELIPSEEFVNSSGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEV
IKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWP
LLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDSREKRDR
SRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVK
PKETVVQEATSNSDIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPSRSKSRS
RSRSRSPSHSRPRRRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRS
SASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPK
PRRSPTPQQSNRGRKSRGSVSPGRTSAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGK
MAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPS
PRKRQKESSPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPR
RYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSP
SISSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPRRGASASPQRRQSP
SPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHLGPQSPARSRS
PSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAA
ATAXGVAAADTTSAQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgacattttcgttcttggacaaagagcttattccttctgaggagtttgtgaattccagt
ggaacaagtgcagaacaggacaatcgcttcagcaacaagcagaagaagctgttgaagcag
ttgaaatttgcagaatgcttagaaaagaaggtggacatgagcaaagtaaatctggaagta
atcaaaccatggataacaaaacgagtaacagaaatccttggatttgaagatgatgtagta
attgaatttatattcaaccagttggaagtgaagaacccagattccaaaatgatgcaaatc
aacctgactggttttttgaatgggaaaaatgctagggagttcatgggagaactgtggcca
ctgctgttaagtgcacaagaaaacattgctggtattccaactgcttttctggaactgaag
aaagaagaaataaaacagcgacagatagagcaagagaaactggcttctatgaagaaacaa
gatgaagacaaggagaagagggataaggaagacaaagacagcagagaaaagagagacaga
tccaggagtccaagaagacgcaaatcgaggtctccttcccctcggaggaggtcatcgcct
gtccgaagagagcggaaacgcagccattctcgctcccctcatcacagaaccaagagccgt
agtgctactcctgcaccagaaaagaaagaggcgactcctgagccagaaccttctgtgaaa
ccaaaggagactgttgttcaagaggcaacttcaaacagtgatatcccaaaagctcctaaa
cccgaacctcctgtaccagagactaaggaaacatcaccagaacgtaattcaaagaaggag
agagagaaggaaaaagagaagactcgtcaaagatccccaagtcggtccaagtcaaggtca
agatctcgatcacgatctccatctcattctagaccaaggaggcgtcatagatcacggtca
agaaggcgaccaagcccaagacgacggccatctccaaggagaaggagccctccgaggcga
atgccccccccacccagacacagaagaagcagatcccctgtgaggcggagaagacggtca
tcagcatccttatctggcagtagctcttcctcctcatcctcgcgttcccgatcaccacca
aagaagccacctaaaagaactgtatccagtcctcctcgtaaaacgcgtaggctctctcct
tcagcaagccctcctaggcggaggcacagaccatccccgccagcaagtccacctccaaag
ccacgtaggtctccaactccccagcagtcaaatcgtggaagaaaaagccgtggctctgtt
tcgcctggcagaacatcagcacccaaacataagagtactgaaaaaagagaatctccttct
ccggcaccaaaaccaaggaaagcagaactgtctgaatcagaagaagataaaggaggtaaa
atggctgcagcagactctgttcaacagaggcgtcagtacagaaggcaaaatcaacagtct
tcatctgattctggttcttcatcgtcatctgaagaggaaagacctaaaagatccaatgtg
aagaatggggaagttggtagacgccgacgccattcgcattcacgcagtccatcaccctct
ccacgaaaacgacagaaggaatcctcccctcgtaggaggaggagaagtccatcgccccca
ccagccaggcggcgacgctctccttcccctgcccctcctcctaggcggcggcggtcacct
tcattacctcgtcgaaggtctccatcaccacccccacgcaggcgctcaccttctccgcgg
agatactccccaccgatacagagacgatattctccttcaccgccaccgaagagaagaacg
gcttctcctcctcccccacctaaacgaagggcgtcaccttctccacagtcaaagcgcaga
gtctcccattcaccaccaccaaaacaaaggagctcgccagctgctaaaaggcgttcgcct
tcgatatcttccaagcacaggaagggatctcctcccagtaggtccaatcgggaaacacgt
tcgccaccacaaaacaaaaggcattcaccttcaccacggcctagagcttctcatacctct
gcaagcccaccaccaccacgaaggggagcttcggcgtcaccccagagaagacagtctcca
tctccaagcactagacccatcaggagggtgtcaagaacgccagaacctaagaagacaaag
gcttccacgccaagtccacgatctgcgagacgggtgtcttcatcacggtctgcatcagga
tcacctgagccagcaccgaaaaaacatctaggacctcagtctcctgcccggtctcgttcc
ccatctgcaaactggtcacctgcaaaaaaggctaaaagcccaactcagagcccatcacct
gcaaggaattcagatcaagaagggggtggaaagaagaagaagaaaaagaaggataagaag
cataaaaaggataaaaagcacaagaaacacaaaaaacataagaaggagaaggctgcggcg
gctacggcgnggggtgtggctgcggcagataccacctccgcacaggaagaccaggaagca
gagacagaacccaaaaaggagacagaaagtgagcccgaagacaaccttgatgacctagaa
aaacacctgcgagagaaggcactgaggtcgatgaggaaggcgcaagtgtcaccaccatcc
tag
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