Pseudomonas canavaninivorans: LOY40_15460
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Entry
LOY40_15460 CDS
T08625
Name
(GenBank) LysR family transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
pcas
Pseudomonas canavaninivorans
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcas03000
]
LOY40_15460
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pcas01504
]
LOY40_15460
Transcription factors [BR:
pcas03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LOY40_15460
Antimicrobial resistance genes [BR:
pcas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
LOY40_15460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
DUF4570
Motif
Other DBs
NCBI-ProteinID:
UVM70017
LinkDB
All DBs
Position
complement(3448879..3449802)
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AA seq
307 aa
AA seq
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MDRLQAMQVFRRIVELGGFGKAADDLGLPRATVSLLIQQLESHLGVQLLQRTTRQVRATL
DGEAYYQRCGQLLDELDDLETSLSAQRSQPRGTLRVDMPIAFGCTWIVPNLPDFYRRYPQ
LQLDIGFHDRQVHLQREGVDCAIRAGNITDQALVARPVVRLHQVTCASPGYLARSGTPRR
LEELSAHSAIAFASGNGRFFPFEFEVAGRVREMQLPGDLILNNADAYVAACEAGFGLIQA
PRYHVQRQLAEGRLVQVLSDHPVPSWPISMVYPPHRQLSPRVRVFIDWVIELLHGAADAQ
GTLMVRV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaccgattacaggcaatgcaggtgttccggcgcatcgtcgagctgggcgggtttggc
aaggcggccgacgacctggggctgcctcgcgccaccgtcagcctgttgatccagcaattg
gaaagccacttgggcgtgcaactgttgcagcgcaccacacggcaagtgcgcgccaccctc
gatggcgaagcctattaccagcgctgcggccagttgctggatgaactggacgacctcgaa
acctcgctttcggcgcaacgcagccaaccccgtggcacgttgcgcgtggacatgcccatc
gccttcggttgcacctggatcgtgccgaacctgccggatttctatcgacgttatccgcag
ctccagctggacatcggtttccacgaccggcaggtacacctgcaacgcgagggcgtcgat
tgcgccatccgggccgggaatatcacggatcaggcgctggtggcgcgaccggtcgtgcga
ttgcaccaggtgacgtgtgccagccctggctacctggctcgctcaggcacgccccgacgg
ttggaagaactgtcggcccatagcgcgatcgcctttgcgtccggcaatgggcggttcttt
ccgttcgaattcgaggtggcggggcgggttcgcgagatgcagctgccgggagatctgatc
ctcaacaatgccgatgcctatgtggcagcctgtgaagccggcttcggcttgatccaggcg
ccgcgttaccacgtccagcggcagttggccgaagggcgattggtgcaagtgttgagcgat
catcccgtgccgtcctggccgatttcgatggtttatccgccccatcgacagctgtcgccc
agggtgcgggtgttcatcgactgggtcatcgagttgctgcatggcgcggcggatgcccaa
ggcaccttgatggtgagggtctag
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