Pseudomonas carboxydohydrogena: AFIC_000287
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Entry
AFIC_000287 CDS
T08963
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00020
Citrate cycle (TCA cycle)
pcax00190
Oxidative phosphorylation
pcax00650
Butanoate metabolism
pcax01100
Metabolic pathways
pcax01110
Biosynthesis of secondary metabolites
pcax01120
Microbial metabolism in diverse environments
pcax01200
Carbon metabolism
Module
pcax_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcax_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcax_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AFIC_000287 (sdhA)
00650 Butanoate metabolism
AFIC_000287 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
AFIC_000287 (sdhA)
Enzymes [BR:
pcax01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AFIC_000287 (sdhA)
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
GIDA
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
WEF51836
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Position
complement(304952..306763)
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AA seq
603 aa
AA seq
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MTANGKAAGPAYPIEDHTYDVVVVGAGGAGLRAVVGCSEAGLRTACVTKVFPTRSHTVAA
QGGISASLGNMHPDDWRWHMYDTVKGSDWLGDQDSIEYMVRNAPAAVYELEHWGVPFSRT
EDGKIFQRPFGGMTRDFGKGQAQRTCAAADRTGHAMLHTMYGQAVRHSAEFFIEFFAIDL
IMDDQGVCRGVVALKLDDGTLHRFRAQTTILATGGYGRAYQSCTSAHTCTGDGGGMALRA
GLPLQDMEFVQFHPTGIFPAGCLITEGARGEGGYLVNAEGERFMERYAPSAKDLASRDVV
SRAMTIEIREGRGVGKKKDHIFLHLDHLDPAVLHQRLPGISESAKIFAGVDVTREPIPVL
PTVHYNMGGIPTNFHGEVVVKKPGDDDAVVQGLMAVGEAACVSVHGANRLGSNSLIDLVV
FGRAAALRCAEKLTPDGKQPELPADSADKALARLDHFRNASGGTPTAKLRDSMQRVMQNN
CAVFRTGDVLAEGKDLIHKVHGGISDIGVTDRSLIWNTDLIETLELDNLIVQAVVTMDSA
VNRTESRGAHAREDFSERDDKNWMKHTLAWIDPKANTTIDYRPVHSYTMTNDIQYIPPKA
RVY
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaacggcaaggccgcgggcccggcctacccgatcgaggatcacacctacgac
gtggtggtggtgggcgccggaggcgcgggattgcgcgccgtggtcggctgttcggaagcg
ggtcttcgcaccgcctgcgtcacgaaagtctttccgacccgctcgcacaccgtcgccgcg
caaggcggcatctccgcctcgctcggcaacatgcatcccgacgactggcgctggcacatg
tacgataccgtgaagggatcggactggctcggcgatcaggactccatcgaatacatggtg
cgcaacgcgcccgccgccgtctatgagcttgaacattggggcgtgccgttctcgcgcaca
gaagacggcaagatcttccagcgtccattcggcggcatgacccgcgatttcggcaagggc
caggcgcagcgcacctgcgccgccgccgaccgcaccggccacgccatgctccacacgatg
tacggtcaggcggtgcgccattcggcggaattcttcatcgagtttttcgccatcgatctc
atcatggacgatcagggcgtctgccgcggcgtggtcgcgctcaagctcgacgacggcacg
ctgcatcgctttcgcgcgcaaaccacgattctcgccaccggcggctacggccgcgcctac
cagtcctgcacctcggcgcatacctgcaccggcgacggcggcggcatggcgctgcgcgcg
ggcctgccattgcaggacatggaattcgtgcaattccatccgaccggcattttcccggcg
ggctgtctcatcaccgaaggcgcgcgcggcgaaggcggctatctcgtcaacgccgagggc
gagcgcttcatggagcgctatgcgccatccgcgaaggatctcgcctcgcgcgacgtcgtc
tcgcgcgcgatgacgatcgaaattcgcgagggacgcggcgtcggcaagaagaaggaccac
atcttccttcatctcgaccatctcgatcccgccgtgctgcatcagcggctgccgggcatt
tcggaatcggcgaagattttcgccggcgtcgatgtcacccgcgagccgatcccggtgctg
ccgaccgtgcactacaacatgggcggcatcccgaccaatttccacggcgaggttgtcgtg
aagaagccgggcgacgacgacgcggtggtgcagggcctgatggcggtcggcgaagccgct
tgcgtgtcggtgcacggcgccaaccgtctcggctcgaactcgctgatcgatctcgtggtg
ttcggccgcgcggcggcgttgcgctgcgccgagaagctgacgccggacggcaagcagccg
gagctgcccgccgattctgccgacaaggcgctcgcccgcctcgaccatttccgcaacgcc
tccggcggcacgccgaccgcgaagctgcgcgactcgatgcagcgcgtgatgcagaacaac
tgcgccgtgttccgcaccggcgacgtgctcgccgaaggcaaggacctgatccacaaggtt
cacggcggcatcagcgacatcggcgtcaccgaccgctcgctgatctggaacaccgacctg
atcgaaacgctcgaactcgacaatctcatcgtgcaggcggtggtgacgatggattccgcc
gtcaaccgcaccgagagccgcggcgcgcatgcgcgcgaggatttctccgagcgcgacgac
aagaactggatgaagcacacgctggcgtggatcgatcccaaggccaacaccacgatcgat
taccgcccggtgcacagctacacgatgaccaacgacattcagtacattccgccgaaggcg
cgcgtgtattga
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