Pseudomonas carboxydohydrogena: AFIC_001450
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Entry
AFIC_001450 CDS
T08963
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00970
Aminoacyl-tRNA biosynthesis
pcax01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AFIC_001450 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pcax03029
]
AFIC_001450 (gatB)
Enzymes [BR:
pcax01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
AFIC_001450 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
AFIC_001450 (gatB)
Mitochondrial biogenesis [BR:
pcax03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
AFIC_001450 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
WEF52939
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All DBs
Position
1465760..1467244
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AA seq
494 aa
AA seq
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MNASVDPKKLIRGVTGDWEVVIGLEVHAQVTSNSKLFSGASTEFGGAPNEHVSLVDAAMP
GMLPVINEECVAQAVRTGLGLKAQINLKSTFDRKNYFYPDLPQGYQISQYKSPIVGEGTV
IIDTPDGGTASVGIERLHLEQDAGKSLHDQHPAMSYVDLNRSGVALMEIVSKPDMRSSDE
AKAYVAKLRSILRYLGTCDGDMEKGNLRADVNVSVRRPGEPFGTRCEIKNVNSIRFIGQA
IEFEARRQIEIIEDGGTIEQETRLYDPNKGETRSMRSKEEAHDYRYFPDPDLLPLEFTAA
YVEELKAGLPELPDEKRVRFIEAYGLTPYDAGVLVAERESADFYEAVLTGLGNAGRDGKL
AANWVINELFGRLNKEGQEIAASPVSAAQLAAIIDLIGEGTISGKIAKDLFEIVWTKGGD
PKALVESLGMKQVTDLGAIEKVVDDIIAANPDKVEQARAKPQLIGWFVGQVMKSSGGKVN
PQAVNDLLKTKLGI
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcatccgtcgatcccaaaaagctcatcaggggcgtcaccggcgactgggaagtc
gtgatcgggctggaagtccatgcccaggtgacctcgaactccaagctgttttccggcgcc
tcgaccgaattcggcggcgcgcccaacgagcatgtgtcgctggtcgatgcggcgatgcca
ggcatgctgcccgtgatcaacgaggaatgcgtcgcgcaggcggtccgcaccgggctcggc
ctcaaggcgcagatcaacctgaaatcgaccttcgaccggaagaactatttctatcccgat
ttgccgcagggctatcagatcagccagtacaagtcgccgatcgtcggcgagggcacggtc
atcatcgacaccccggacggcggcaccgcgtcggtcggcatcgagcggctgcatctggaa
caggacgcgggcaagtcgttgcacgaccagcacccggcgatgtcctatgtcgatctcaac
cgctcgggcgtcgccctgatggagatcgtctccaagccggacatgcgctcgtccgacgag
gccaaggcctatgtcgccaagctgcgcagtatcctgcgttatctcggcacctgcgacggc
gacatggagaagggcaacctgcgcgccgacgtcaacgtgtcggtgcgccggccgggcgag
cctttcggcacccgctgcgagatcaagaacgtcaactcgatccgtttcatcggtcaggcg
atcgagttcgaggcccgccgccagatcgagatcatcgaggatggcggtactatcgagcag
gagactcggctctatgaccccaacaagggtgagacgcggtcgatgcgctccaaggaggag
gcgcacgattaccgctacttccccgatcccgatttgctgccgctggaattcaccgccgcc
tatgtcgaggaactgaaggccgggctgccggaactacccgacgagaagcgggttcggttc
atcgaagcttacggcctgacgccctatgacgccggcgttctggttgccgagcgggagagc
gccgacttctacgaggcggtgctgactgggctcggcaacgccggacgcgacggcaagctc
gccgccaactgggtcatcaacgagttgttcggccgcctgaacaaggaagggcaggagatt
gccgcatccccggtctcggctgcgcagcttgccgcgatcatcgacctgatcggagaagga
acgatctccggcaagatcgccaaggacctgttcgagatcgtctggaccaagggcggcgat
ccgaaggcgctggtcgagagcctcggcatgaagcaggtcaccgatctcggcgcgatcgag
aaggtggtggacgacatcatcgccgccaaccccgacaaggtggagcaagcgcgcgccaag
ccgcaactgatcggctggttcgtgggtcaggtgatgaaatcgtcgggcggcaaggtcaat
ccgcaggccgtcaacgatcttctcaagaccaaactcggcatctga
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