Persicimonas caeni: FRD00_27520
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Entry
FRD00_27520 CDS
T06769
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pcay
Persicimonas caeni
Pathway
pcay03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRD00_27520 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcay03019
]
FRD00_27520 (pnp)
03016 Transfer RNA biogenesis [BR:
pcay03016
]
FRD00_27520 (pnp)
Enzymes [BR:
pcay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FRD00_27520 (pnp)
Messenger RNA biogenesis [BR:
pcay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FRD00_27520 (pnp)
Transfer RNA biogenesis [BR:
pcay03016
]
Prokaryotic type
tRNA degradation factors
FRD00_27520 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
QED35582
LinkDB
All DBs
Position
7417125..7419230
Genome browser
AA seq
701 aa
AA seq
DB search
MSIVREGAKLGDKELTIEHGRMAMQANGSIVISYGDSQVLCTACDGGEKEHLPFFPLLCD
YVENFWAAGKVPGGFFKREGKPSEKATLTSRLIDRPHRPLFPEGYRRDTQLVAWVISADQ
VNDTDVLAITGCSAALMVSDLPFNGPVAGVRVGLVDGEFIANPTFEQREKSDMDIVLAVT
DKAIVMVEGEAKEVPEEVMVDALEFGQNAVQDVLELQKRLAEEVGKERMDVADKELDPEI
VSAVYDEVHEDLAAALQIKDKLERYGRQDELKAQVVEALSERFEDREGEIKDAFGDLKKS
IMRKRVIETGERIDGRSSTDVRKVTVEVGLLPKAHGSALFTRGETQALVTCTLGNEYDEK
VIDGLEDDYKKKFYLHYNFPAFSVGESRPFRSTSRRETGHGELAERALTAALPDFEEEFP
YTVRIVSDTLSSNGSSSMAAVCGGSLAMMDAGVPFKKPTAGIAMGLIKEGDDHVVLTDIL
GDEDHMGDMDFKVTGTADGITAFQLDTKIEGISFDTMKQALLQAKDGRDHILGVMNETLA
EPRKDLSENAPRITSIKINPSSIGAVIGSGGKTIRGIQDTTGASINIDDDGTVKIAADNA
EAAQQAIEIIEGLTAEPEVGETYLGTVKNITDFGAFVEILPGTEGLCHISELTEGRVDKV
EDILKEGDEVLVKCLDVDMKRGRIKLSRRAALGEQKEGSEE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgtacgcgaaggcgcgaaactaggagacaaggaactgaccatcgagcacggc
cgcatggctatgcaggccaacggctcgatcgtcatcagctacggtgacagccaggtgctg
tgcaccgcatgtgacggcggcgagaaggagcaccttccgttcttcccgctgctttgcgac
tacgtcgagaacttctgggcggccggcaaggtccccggtggcttcttcaagcgcgaaggt
aagccgagcgagaaggcgacgctgaccagccgcctgatcgaccgtccgcaccgtccgctg
ttcccggaaggctaccgtcgtgacacccaactggtcgcatgggtcatttcggccgaccag
gtcaacgacaccgacgtgctcgccatcaccggctgctcggctgcgcttatggtcagcgac
ctgccgttcaacggcccggttgccggcgtgcgtgtcggcttggtcgacggcgagttcatc
gccaaccccaccttcgaacagcgcgagaagtccgacatggacatcgtgcttgcggtgacc
gacaaggccatcgtcatggtcgaaggtgaggccaaagaggtgcccgaagaggtgatggtc
gacgcgctcgagttcggccagaacgccgtccaagacgtcctcgaactgcagaagcgcttg
gccgaagaagtcggcaaagagcgcatggacgtcgctgacaaagaactcgaccccgaaatc
gtcagcgccgtgtacgacgaggtccacgaagacctcgccgctgcgcttcagatcaaggac
aagttggagcgctacggccgtcaggacgagctgaaagcgcaggttgtcgaagctctctcc
gagcgcttcgaagaccgcgaaggcgagatcaaggatgcctttggcgacctcaaaaaatcg
atcatgcgcaagcgcgtcatcgagaccggcgagcgcatcgacggtcgtagctccaccgac
gtgcgcaaagtgaccgtcgaagtgggcctgcttcccaaagcccacggctcggcgctgttc
acccgcggtgagacccaggcgctggtgacctgcacgctcggcaacgagtacgacgagaag
gtcatcgacgggctggaggacgactacaagaagaagttctacctgcactacaacttcccg
gccttcagcgtcggtgaaagccgcccgttccgcagcacctcgcgtcgcgaaaccggccac
ggcgaactcgccgagcgcgccctgaccgcggcgcttccggacttcgaagaggagttcccc
tacacggtgcgtatcgtcagcgacacgctcagctcgaacggctcgagctcgatggccgct
gtctgcggtggcagcctcgccatgatggacgccggtgtgccgttcaagaagccgactgcc
ggcatcgccatgggcctcatcaaagagggcgacgaccacgtcgtcctgaccgacatcctc
ggtgacgaggaccacatgggtgacatggacttcaaggtcaccggtaccgccgacggcatc
acggctttccagctcgacaccaagattgaaggcatcagcttcgatacgatgaagcaggcg
ctccttcaggccaaagatggtcgcgaccacatcttgggcgtcatgaacgagacgctggcc
gagccgcgcaaggacctgtccgagaacgctccgcgtatcacgtccatcaagatcaacccg
tcgtccatcggcgcggtgatcggctcgggtggtaagaccatccgcggcattcaggacacc
accggcgccagcatcaacatcgacgatgacggcaccgtcaaaatcgcggctgacaacgcc
gaagctgcgcagcaggccatcgagatcatcgaaggtctgaccgccgagccggaagtgggc
gagacctacctcggcacggtcaagaacatcaccgacttcggcgccttcgtcgagatcctg
ccgggcaccgagggcctttgccacatctcggagctcacggagggccgcgtcgacaaggtc
gaagatatcctcaaagagggcgacgaggtgctggtcaagtgcctcgacgtcgacatgaag
cgtgggcgcatcaagcttagccgccgcgctgctctcggtgagcagaaagaaggttccgag
gagtaa
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