Plasmodium chabaudi: PCHAS_1227400
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Entry
PCHAS_1227400 CDS
T01108
Name
(RefSeq) DNA repair and recombination protein RAD54, putative
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pcb
Plasmodium chabaudi
Pathway
pcb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PCHAS_1227400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcb03400
]
PCHAS_1227400
DNA repair and recombination proteins [BR:
pcb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
PCHAS_1227400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
3498264
NCBI-ProteinID:
XP_745142
UniProt:
A0A4V0KAC8
LinkDB
All DBs
Position
12:complement(993337..996435)
Genome browser
AA seq
1032 aa
AA seq
DB search
MRKYGGNTKRNRDDEADESNNGDRKCITLVRATLLPILSIGKNEKTTLFTPFRNPLPGFV
SNKSLYLKKTLGAKVRKTGWINLMKNSIPRRSDETGDENDKVEEIIRKFDPLVLYEDENS
KIEVDPILAQYLREHQREGVQFVFECLMNLKDEKISGCILADDMGLGKTLQSISVLYTLL
KQGYNKKPAVRRCLILCPASLINNWNDEINKWLPNRCTVTCVNDNAKEKIVSKLEGFKYD
LKSTILICSYECFRINNESIDKSAIDMIICDEAHRLKNDKTKTYTSIYKLSAKKRLLLSG
TPIQNDLGEFFALISLCNPDLFDDTNSFRKKFANPILIGRDKDATEKEQQIASERLAELS
TITNKFILRRTNNLLSKVLPVKYLINIFVKLNPIQEALYVLFLKDKKLLKSDNSNNKVNV
LINIKKLEKICNHPLLLNANDIKDIGHIPIVKLIEDVVAESGKGRGSKISNKSSVNSSAN
ASTENISTSLNNNNNASKDGEYLRERRKAVELDYDKSVKKIIEECKRDVYRCYYNLSSKF
QLLHFLLKTIKQDTNDKVVIVSNYTQTLDYMEILCKENHYKFVRLDGGISIKKRHKVISD
FTNTDDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWREGQKKICYIY
RLFCTGTIDEKVYQRQISKDGLSSMIVTNTNLSKDQLSDENVKKLFNYKQNTICETHDNI
ECNRCNFKDNTEVYSEQLEDFEEEDVNTWAHHLNIDTVPDAILIKAVKEATEYKINHMNT
LPILKKLKQDFVTFSMSCKIEFRDDLIKQKANKNNVSYQPIVVSDKKETPKSKRAKGRKA
DDYSDSTNDEEEEEEEEEEEEDDEEDDEDEEDEDDEEEDEDDDEEEDEEEEDEMDMKKKD
CTKKLRELMEYQKEKELIKKRNHSSEIEKREEGEKSSRDNSFSHRIENSKNDKKRQDNNI
IELNGQEKSTKLKMNDKNSYEDLNSVRVTRNMTQKNLMELLSQDDESKAEIVISQDEDMS
VENISTDSSCFV
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagtacggaggaaacacaaaacgaaacagagatgatgaggcagatgaaagcaac
aatggggatagaaaatgcatcacattggttagagcaacattattaccaattttgagtata
gggaaaaatgaaaaaacaacattatttacaccatttcgaaatccattaccaggattcgta
agtaataaaagtttatatttaaaaaaaacattaggtgctaaggtaaggaaaacaggatgg
ataaacttgatgaaaaattcaattcctagaagatcagatgaaacaggtgatgaaaatgat
aaagttgaagaaataataagaaagtttgatcctttagttttatatgaagatgaaaatagt
aaaatagaagtcgatccaatattagcacaatatttaagagagcatcaaagagaaggtgta
caatttgtttttgaatgtttaatgaatttaaaagatgaaaaaataagtggatgtatatta
gcagacgatatgggattgggaaaaacattacaaagtataagtgtgttatatacattatta
aaacagggatataataagaagccagctgtaagaaggtgcctaattttatgtccagctagt
ttaataaataattggaatgatgaaattaataaatggttaccaaacagatgtactgtaaca
tgtgttaatgataatgcaaaggaaaagattgtaagtaaattagaaggttttaaatatgat
ttaaaatcaacaattttaatatgttcctatgaatgttttcgtattaataatgaatcaatt
gataaatcagctatagatatgataatatgtgatgaagcacaccgattaaaaaatgataaa
acaaaaacgtacacaagtatatataaattatcagcaaaaaaaagattattattatcaggt
acaccaatacaaaatgatttaggcgaattttttgcattgatttctttgtgtaatcctgat
ttatttgatgatacgaattcatttcgaaaaaagtttgcgaacccaatattaataggacga
gataaagatgcaacagaaaaggagcaacagattgcatctgagcgtttagcagagttatca
actattactaacaagtttatattaagaagaactaataatttattatctaaagttttgcca
gtaaaatatttaataaatatttttgtaaaattaaacccgattcaagaagctttatatgta
ttatttctaaaggataagaagttattaaaatctgataactcaaataacaaagttaatgta
ttaattaatataaaaaaattagaaaagatatgtaaccatcctttattactcaatgcaaat
gatataaaggacattgggcatattccaatcgtaaaactgattgaagatgtggtagcagaa
agtggaaaaggtcgaggaagtaaaataagtaataaaagtagtgtcaattcgtctgctaat
gctagtacagaaaatatcagtaccagtcttaacaataataataatgcttctaaagatgga
gaatatttaagagaaagaagaaaagcagttgaattagattatgataaatctgtaaaaaaa
ataatagaagaatgtaaacgagatgtatatagatgttattataatttatcatctaaattt
caattgttacattttttacttaaaacaattaaacaagatactaatgataaagtagttata
gtcagtaattatacgcaaacattagattatatggaaatattatgtaaagagaatcattat
aaatttgttcgattagatggtggtataagtataaaaaaacgacataaagttattagtgat
tttactaatacagatgatatattcatatttttgttatcgtcaaaatcgggaggatgtggt
attaatctgataagttcaaatcgacttattttattagaccctgattggaatccagcaaat
gataaacaagcattagcaagggtttggcgtgaagggcaaaaaaaaatatgttatatttat
cgattgttttgtacaggtactattgatgaaaaggtatatcaaaggcagataagtaaagat
ggtctatcttcaatgattgtaacaaatacaaatttatctaaagatcaattatcagatgaa
aacgttaaaaaattatttaattataaacagaatacaatatgtgaaacacatgataatatt
gaatgtaatagatgtaactttaaagataatacagaagtttattcggaacagttagaagat
tttgaagaagaagatgtaaatacttgggctcatcatttaaatatcgatacagtaccagat
gcaattttaattaaagcagttaaagaggcaacggaatataaaataaatcatatgaacaca
ttgccaatacttaaaaaattaaagcaagattttgttaccttttctatgagttgtaaaata
gaatttagagatgatcttattaaacaaaaggcaaacaaaaacaatgtttcatatcaacct
attgtcgtgtcagacaaaaaagaaactccgaagtcgaagcgagccaaaggaagaaaggcc
gacgattatagcgatagtaccaatgatgaagaggaagaagaagaggaagaggaggaagag
gaggatgacgaggaggatgacgaggatgaggaagatgaagatgacgaagaggaggatgag
gacgatgacgaagaggaggatgaggaagaggaggatgagatggacatgaaaaaaaaggac
tgtacaaaaaagcttcgagaattaatggaatatcagaaggaaaaagaattaattaagaaa
cgaaaccattcgagtgaaattgaaaaacgagaggaaggagagaaaagtagtagagataat
tcattttcacatagaattgagaattccaaaaatgataagaaaagacaagacaataatatt
attgaattaaatggtcaagaaaaatcgacaaaattaaaaatgaatgataaaaattcctat
gaagatttaaattcagtacgtgttacaagaaatatgacacaaaaaaatttgatggaactt
ttatcacaagatgatgaatcaaaagctgaaattgtcatatcacaagatgaagatatgtca
gttgaaaatataagtactgatagttcctgctttgtatga
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