KEGG   Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_032260
Entry
PCC21_032260      CDS       T02320                                 
Name
(GenBank) type VI secretion system effector, Hcp1 family
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pcc  Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PCC21_032260
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcc02044]
    PCC21_032260
Secretion system [BR:pcc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PCC21_032260
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AFR04629
UniProt: A0AA85ZN17
LinkDB
Position
complement(3648218..3648736)
AA seq 172 aa
MPTPCYISIEGKTQGNITAGAFTSDSVGNIYVEGHEDEMLVQEFKHIVTVPTDPQSGQPS
GQRVHKPFKFTVALNKAVPLMYNALASGEMLPTVTLKWYRTSVEGKQEHFFSTVLTDSTI
VDIDCKMPHCQDPSKLDYTQLIEVSLAYRKIDWEHTVAGTSGSDDWRAPVEA
NT seq 519 nt   +upstreamnt  +downstreamnt
atgccaactccatgctatatcagcatcgaaggtaaaactcagggcaacattactgcgggt
gctttcacttctgattctgtcggcaacatctatgtggaaggccacgaagacgaaatgctg
gttcaggaattcaaacacattgtcaccgtaccgaccgacccacagtctggtcagccgtcc
ggccagcgtgtacacaagccgttcaaattcaccgtcgcgctgaacaaagcggttccactg
atgtacaacgccctggcgtctggcgaaatgctgccgaccgtgaccctgaaatggtaccgc
acgtcggttgaaggtaagcaagaacacttcttctctaccgtgttgactgactccaccatc
gtggacatcgactgcaaaatgccacactgccaggacccgtcaaaactggactacacccag
ctgatcgaagtgtcgctggcctaccgcaaaatcgattgggagcacaccgttgccgggact
tccggctctgatgactggcgtgcaccggtcgaagcgtaa

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