Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_033520
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Entry
PCC21_033520 CDS
T02320
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcc03016
]
PCC21_033520
Enzymes [BR:
pcc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PCC21_033520
Transfer RNA biogenesis [BR:
pcc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PCC21_033520
Prokaryotic type
PCC21_033520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AFR04755
UniProt:
A0AA86DG02
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All DBs
Position
complement(3805597..3806643)
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AA seq
348 aa
AA seq
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MENNEQLVWLHGEPQATGSLKSTAEDFLVVEDLGFQPDGDGEQVLVRVRKRGCNTQFVAE
MLAKFVRLPLRAVSYAGLKDRHAVTEQWFCLHMPGKETPDFSSLALEGCDVLEVTRHRRK
LRIGTLRGNHFTLVLRQVSDRNEVDARLALIAANGAPNYFGSQRFGRNGNNLEQARLWAN
NEIRVKERSKRSFYLSASRSAMFNQVASARLAEQKAKTVLCGDALQLTGRGSWFVAKPDE
LDVLQTRLDAGELQITAPLPGDGELGTQDDARVFEEQALLGQDTLWSLIKRERVEPARRA
VLLYPQQMHWEWQDDTTVEVKFWLPAGSFATSVVRELLHSQQDTDLGA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataacgaacaactcgtctggttgcacggtgaaccacaggctactggctcattg
aaatccactgctgaagattttctggtggtggaagatctggggtttcagccagatggtgac
ggtgagcaggtattggtgcgcgtgcgcaaacgcggttgcaatacgcaatttgtggccgag
atgctggcgaaatttgttcgtctaccgctgcgtgccgttagctatgcgggcctgaaagat
cgtcatgctgtcaccgaacagtggttctgcctgcacatgccgggaaaagagacgcctgat
ttctcctcgctggcgcttgaaggctgtgatgtgcttgaggtgactcgccatcgtcgcaag
ctgcggatcggtacgctgcgaggtaaccattttacgctggtgctgcgtcaggttagcgac
cgaaacgaggtcgacgctcgtttggcgctgatcgccgcgaacggcgcgcctaattatttc
ggcagccagcgtttcgggcgcaacggaaataatcttgagcaggctcgtctttgggcaaat
aacgagattcgggtaaaagaacgcagtaagcggagtttttatctttccgccagccgcagt
gcgatgtttaatcaggttgccagtgcacgactcgcggagcagaaggcgaaaacggtcttg
tgtggtgatgcattgcagctaacagggcgcggcagctggtttgttgctaagcctgatgaa
ttagacgttttacagacgcgccttgatgcgggcgaactccagattaccgcgccgctgcct
ggtgatggtgaactgggcacgcaggatgacgcgcgggtatttgaagaacaggctttgctc
ggacaagacacgctgtggtctttgattaagcgtgagcgggtcgaacctgcccgacgtgcg
gtgctgctgtatccgcagcagatgcactgggaatggcaggacgatacgactgtggaagta
aagttttggctacctgcgggcagttttgcgaccagcgtggtgcgtgaattgctgcattca
cagcaggataccgatctcggtgcctga
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