Pseudomonas chlororaphis PA23: EY04_25645
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Entry
EY04_25645 CDS
T03201
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00470
D-Amino acid metabolism
pch00550
Peptidoglycan biosynthesis
pch01100
Metabolic pathways
pch01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EY04_25645
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EY04_25645
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
EY04_25645
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pch01011
]
EY04_25645
Enzymes [BR:
pch01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
EY04_25645
Peptidoglycan biosynthesis and degradation proteins [BR:
pch01011
]
Precursor biosynthesis
Amino acid ligase
EY04_25645
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATP-grasp_5
GARS_A
TTL
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
AIC22180
UniProt:
A0A7S5HT91
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All DBs
Position
complement(5653095..5654063)
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AA seq
322 aa
AA seq
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MTAAYASLFSTIAPKDFGRVAVLFGGKSAEREVSLKSGNAVLEALLSAGVDAFGIDVGDD
FLQRLLNEKIDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWH
SLGIPTPRHAVLGSEADCICAATELGMPLIVKPAHEGSSIGMAKVTSASELIDAWKAAST
YDSQVLVEQWIQGPEFTIATLRGQVLPPIALGTPHTFYDYDAKYLASDTQYRIPCGLDSD
KEQELMDLTAKACGALGIAGWARADVMQDADGQFWFLEVNTAPGMTDHSLVPMAARAAGL
DFQQLVLAILAESVVSNAEPRG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgcctacgcctctctgttttcgaccatcgcgccgaaggatttcggccgtgtc
gccgtgctgttcggcggcaagagcgccgagcgcgaagtctcgctgaagtccggcaatgcc
gtgcttgaagccttgctgagcgccggtgtggacgccttcggcatcgacgtcggtgacgac
ttcttgcagcgcctgctgaacgagaagatcgaccgcgccttcatcatcctccacggccgt
ggcggcgaagacggcagcatgcagggcttgctggaatgcctggggattccctacaccggc
agcggcatcctggcttcggcgctggcgatggacaaactgcgtaccaagcaggtctggcac
agcctcggtattccgacgccacgccacgccgtacttggctccgaggccgattgtatttgc
gcggctacggaactgggcatgcctttgatcgtcaaaccggcgcatgaaggttccagtatt
ggtatggccaaagtgacatccgcgtccgaactgatcgacgcatggaaagcggccagcacc
tacgactcgcaagtcttggttgaacaatggattcaaggtccggagttcaccatcgccacg
ctgcgcggccaggtattgccaccgatcgccctgggcacgccccacacgttttacgactac
gacgccaagtacctggcttccgatacccagtaccggatcccgtgcggcctcgacagcgac
aaagagcaggagctcatggacctgacggcgaaggcctgcggggcgctcggtatcgccggt
tgggcgcgtgccgacgtgatgcaggacgccgacggccagttctggttcctggaagtgaat
accgcccccggcatgaccgatcacagcctggttccgatggcggcgcgtgccgccggtctg
gatttccagcagctggttctggccatcctggcggaaagtgtcgtcagtaacgcagagccg
cgaggttaa
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