Pseudomonas chlororaphis PA23: EY04_25665
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Entry
EY04_25665 CDS
T03201
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00470
D-Amino acid metabolism
pch00550
Peptidoglycan biosynthesis
pch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EY04_25665 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EY04_25665 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pch01011
]
EY04_25665 (murD)
Enzymes [BR:
pch01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
EY04_25665 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pch01011
]
Precursor biosynthesis
Amino acid ligase
EY04_25665 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Motif
Other DBs
NCBI-ProteinID:
AIC22184
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All DBs
Position
complement(5657784..5659130)
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLANRGVSFAVADTRENPPELATLRRDYPHVEVRCG
ELDVDFLCRADELYVSPGLALATPALQAAAARGVKLSGDIELFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTDQLGAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVFNRQDALTRPLIGEGLPCWTFGLSKPD
FKAFGLREENGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSAL
RTFAGLEHRCQWVRDLDGVGYYNDSKATNVGAALAAIEGLGADIEGKIVLIAGGDGKGAE
FKDLRDPVAANCRAVILMGRDSDKIGEAIGDAVPLIRVGSLVEAVAQCRATAQAGDVVLL
SPACASFDMFKNYEDRGHQFVRAVEDLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcgtgtcgtttgccgtcgccgatacgcgggaa
aatccaccggaactggccacgctgcgccgtgactatccgcatgtggaagtgcgttgtggc
gagctggacgtcgacttcctgtgccgtgccgacgagctctacgtgagccccggcctggcc
ctggcgaccccggccctgcaagccgccgccgcccgtggggtgaaactctccggcgatatc
gagctgtttgcgcgtaacgcgaaggcgccgattgtcgccatcagcggttccaacgcgaaa
agcaccgtgaccaccctggtgggggaaatggcggcggcggcgggcaagcgggtcgccgtg
ggtggaaacctgggtaccccggccctggacctgctcagcgacgacgtcgagctgtacgtc
atggaactgtccagcttccagctggagaccaccgatcagctgggtgccgaagtggccacc
gtgctgaacatcagcgaagaccacatggaccgctacagcggcctgccggcgtatcacctg
gccaagcaccggatcttccggggcgcccggcaggtggtgttcaaccgccaggatgccttg
acccggccattgatcggcgaaggcctgccgtgctggaccttcggcctgagcaaacccgac
ttcaaggcgttcggcctgcgtgaagagaacggcgagaaatacctggccttcgaattccag
aacctgatgccggtgcgcgagctgaagatccgcggcgcccataaccagtccaacgccctg
gcggcgctggccctggggcatgcggttggcctgccattcgacgccatgctctcggccctg
cgcaccttcgccggcctcgagcaccgctgccagtgggttcgcgacctggatggcgtgggt
tattacaacgactccaaggccaccaacgttggcgctgccctggcggccatcgaaggcctg
ggcgcggacatcgaaggcaagatcgtgctgatcgccggtggcgacggcaaaggtgccgag
ttcaaggacctgcgcgacccggtggcggccaactgccgcgccgtgatcctgatgggccgc
gattctgacaagatcggcgaggccatcggcgatgccgtgccgctgattcgtgtcggctcc
ctggtcgaagccgtggcgcaatgccgtgccaccgcccaggccggtgacgtggtgctgctg
tcgccggcctgcgccagtttcgacatgttcaagaattacgaagaccgtggtcaccagttc
gtccgcgccgtggaggatctggcatga
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