Pseudomonas chlororaphis PA23: EY04_25680
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Entry
EY04_25680 CDS
T03201
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00300
Lysine biosynthesis
pch00550
Peptidoglycan biosynthesis
pch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EY04_25680
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EY04_25680
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pch01011
]
EY04_25680
Enzymes [BR:
pch01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
EY04_25680
Peptidoglycan biosynthesis and degradation proteins [BR:
pch01011
]
Precursor biosynthesis
Amino acid ligase
EY04_25680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AIC22187
UniProt:
A0A7S5LQQ0
LinkDB
All DBs
Position
complement(5661578..5663041)
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELTLDSRNVRAGDLFLAVPGGKFDGRAHIADALQRGAAAVA
YEVEGATVLPITDVPLIPVKGLAAQLSDIAGRFYGDPSRHLNLIGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGSGFYGALQSGMHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVSALAFDVAVLTNLSRDHLDYHGTMEAYGSTKAKLFGWTDLGCRVINLDDEFGRL
LASDEQDSRLITYSLEDPRAYLYCREAQFDDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAVGALLGLDYALDEILHVLPKLEGPAGRMQRLGGGSQPLVVVDYAHTPDALEKVLLAL
RPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRTEDPAQIFDDIRTGF
SAVDKVEFVSGRGLAIAQLIAGASADDVIVLAGKGHEDYQEINGVRLDFSDLVEADRALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttagcctgaacaagattttcgcccacgctggtcgcgatctgctgattcgcgaa
ctgaccctggacagccgcaatgtgcgcgccggcgatctgttccttgcggttcctggcggc
aagttcgatggccgtgcgcacatcgccgatgccttgcagcgcggtgcggctgccgtggct
tatgaagtcgaaggcgcgaccgtcctgccgattaccgacgtaccgctgattccggtcaaa
ggcctggcggcgcaactgtcggatatcgccggacgtttttatggcgatccgagtcgtcat
ctcaacctgattggcgtgaccggtaccaacggcaagaccagcgtgacccagttggtcgcg
caagcgctcgacctgctgggccagcactgcggcatcgtcggcaccctgggcagcggtttt
tatggcgcgctgcaaagcgggatgcacactacgccgaacccgattgccgtacaggccacc
ctggccgacctgaaaaaggccggtgccaaggccgtggcgatggaagtgtcgtcccatggg
ctcgaccaggggcgggtcagtgcgctggccttcgatgtggcggtgctgaccaacctgtct
cgcgaccacctggattatcacggcaccatggaagcctacggctccaccaaggccaagctg
ttcggttggaccgacctgggttgccgggtcatcaacctcgacgatgagttcggtcggctg
ttggccagtgacgagcaggattcgcggctgatcacctacagcctcgaggatccgcgggcc
tatctgtactgccgcgaagcgcaattcgacgatgaaggcgtgcgtgcgaccctggtgact
ccgcagggtgagcatcatctgcgcagcaccttgctcggccgtttcaacctgagcaacgtg
ctggccgctgtcggtgccttgcttggcctggattacgccctcgacgaaatccttcacgtg
ctgccgaaactggaaggtccggccggtcgcatgcagcgcctgggcggcggttcgcaaccg
ctggtggtggtcgattacgctcacaccccggatgccctggaaaaagtattgctggccctg
cgtccccacgccaagggccgtttgctgtgcctgttcggctgcggcggcgatcgcgatcgc
ggcaagcgtccgctgatggcggaagtggtcgagcgcctggccgacggcgtgctggttacc
gacgacaacccgcgtacggaagatccagcgcagattttcgacgacattcgtaccggcttc
agtgcggtggacaaggtcgagttcgtctccggtcgcggcctggccatcgcccagctgatc
gccggcgcttcggcggatgacgtcattgtcctggccggtaaaggtcatgaggactatcag
gaaatcaacggcgtgcgtctcgacttctccgacctggtggaagccgaccgggcgctgact
gcgtgggaggtggcccatgcttaa
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