Pseudomonas chengduensis: QYM18_21170
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Entry
QYM18_21170 CDS
T09586
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pche
Pseudomonas chengduensis
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pche03000
]
QYM18_21170
Transcription factors [BR:
pche03000
]
Prokaryotic type
Helix-turn-helix
Other families
QYM18_21170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
Mg_chelatase
PAS_4
AAA_3
AAA
HTH_22
HTH_28
AAA_7
TsaE
DUF815
PAS_7
HTH_17
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WKC36937
LinkDB
All DBs
Position
4538725..4540554
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AA seq
609 aa
AA seq
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MTEAARAPAHDTLIQESWSRCRDYGLTHQSSPRFDPPPAGELSALLESRQALVQTTHQEV
LPYYGTILSNSNCLIMLADDQGRLLQSWGDQRFIEPRQAAGFVAGASWLERYTGTNAIGT
ALSCGQAVHIQHDEHFLKANRFMTGSASPIFDEQRRMIAVLDVSSDSYLPPAHTLGMVKM
MSQSVENRLILKLFADQYHLLSFNTSLDNLDSPWAGLVVFDEQGHVVSANRRADNLLGQP
LTYGAIEQLFDVPLQQLLNQPDGQPFSLRTSGHFRFHARVRRPARPAPIQPRDFRPQATQ
STPQEPHLHTLSAGDARMDKVVRQAERLLEKDIPILIQGETGAGKEVFVKALHQASSRAS
QPFIAVNCAAIPAELVESELFGYEKGAFTGASQKGHIGLIRKAHKGTLFLDEIGDMPLRV
QARLLRVLQERCVQPLGSSELHPVDVRLVSATNRPLRQDVDSGQFRADLYYRISGLNLEL
PPLRERSDKQALFHKLWEQHREPHQRAGISREVLELFQHHPWPGNLRQLSSVLRVALAMA
DDQPIRAEHLPDDFFLDLPTDTTLQAHPEPDDLASQYQACGGNISYLARHLGLSRNTLYK
RLREQGVRP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagctgcccgcgccccggcgcacgacaccctcatccaggagtcctggtcgcgc
tgtcgtgactatggcctgacccatcagagctcaccgcgcttcgacccaccgcctgccggc
gaactttcggccctgctggaaagccgccaggccctggtgcagaccacccaccaggaagtg
ctgccttactacggcaccattctgtccaactccaactgcctgatcatgctcgccgacgac
cagggccggctgctgcaatcctggggcgaccagcgcttcatcgaaccacgccaggccgcc
ggcttcgtcgccggcgccagctggctggagcgctacaccggcaccaacgccatcggcacc
gcgctcagttgcggccaggccgtgcacatccagcacgatgaacactttctcaaggccaac
cgtttcatgaccggttcggcctcgccgatcttcgacgagcaaaggcgcatgatcgccgtg
ctcgacgtgtccagcgacagctacctgccgccagcgcacaccctgggcatggtcaagatg
atgagccagtcggtggagaaccgcctgatcctcaagctgtttgccgaccagtatcacctg
ctcagcttcaacaccagcctcgataacctcgacagcccctgggccggcctggtggtgttc
gacgagcagggccacgtagtgtccgccaaccgccgcgccgacaacctgctgggccaaccc
ctgacctacggcgccatcgagcagctgttcgacgtgccgctgcaacagttgctcaaccaa
ccggacggccagcccttcagcctgcgcaccagtggccattttcgctttcacgctcgagta
cgtcgccctgcccgacccgctccgatccagcctcgcgacttccgcccccaggctacccag
agcacgccgcaagagccacacctgcataccctgagcgctggtgatgcgcgcatggacaag
gtcgtgcgccaggccgaacgcctgctggagaaggacattccgatcctgattcagggcgaa
accggtgccggcaaggaggttttcgtcaaggcactgcaccaggccagttcgcgcgccagt
cagccgttcatcgcggtcaactgcgcggccattcccgccgagttggtggaatcggagctg
ttcggctacgaaaaaggcgcctttaccggcgccagccagaagggccacatcgggctgatc
cgcaaggcgcacaagggcacgctgtttctcgacgagatcggcgacatgccgctgcgcgtg
caggcgcgcctgctgcgcgtgctgcaggaacgttgcgtgcagccgctgggcagcagcgaa
ctgcatccggtcgacgtgcgcctggtctccgccaccaatcgtccgctgcgccaggatgtc
gacagcggccagttccgcgctgacctgtactaccgcatcagcggcctgaacctcgagctg
ccgccactgcgcgaacgcagcgacaagcaggcgctgttccataaactgtgggagcagcac
cgcgaaccccaccagcgcgcgggtatcagccgcgaggtactggagctgtttcagcaccac
ccctggccaggcaacctgcgccaactcagcagcgtgctgcgcgtggcgctggccatggca
gacgaccagcccatccgcgccgaacacctgccggacgacttctttctcgatctgccgacg
gacacgaccctgcaagcacaccccgagcccgacgatctggccagccagtaccaggcctgc
ggcggcaacatttcctaccttgcccgccacctcggactgagccgcaacacgctgtacaag
cgcctacgcgaacagggcgtcagaccctga
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