Paenibacillus chitinolyticus: PC41400_21180
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Entry
PC41400_21180 CDS
T06610
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PC41400_21180 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchi03019
]
PC41400_21180 (pnp)
03016 Transfer RNA biogenesis [BR:
pchi03016
]
PC41400_21180 (pnp)
Enzymes [BR:
pchi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PC41400_21180 (pnp)
Messenger RNA biogenesis [BR:
pchi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PC41400_21180 (pnp)
Transfer RNA biogenesis [BR:
pchi03016
]
Prokaryotic type
tRNA degradation factors
PC41400_21180 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
SPATA25
KH_5
PCB_OB
RapA_C
Motif
Other DBs
NCBI-ProteinID:
QAV20037
UniProt:
A0A410X0D0
LinkDB
All DBs
Position
complement(4694785..4696890)
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AA seq
701 aa
AA seq
DB search
MEKRVQMDLAGRPLILETGRLAKQANGAVLARYGDTVVLCTVTASSEPKDLDFFPLTVNY
EERLYAAGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQIVAVVMSVDQE
CPPEITAMIGVSAALSISDVPFSGPVGGVIVGRIDGNFVVNPTPAQEDKSDVHLVVAGTK
DAIMMVEAGAAEVPEDVMLEAIMFGHDEIKKVIALQEQLVAEAGVPKMEVKLHSVDGEIS
TAVREFAEARLVEAIKVQEKHARQEAIDAVNADAVAHFTALYEETPEKLKDVKEVLHDIV
KDEVRRLITHDKVRPDGRALDEIRPIDVDINLLPRTHGSGLFTRGQTQALSVCTLGALGD
VQILDGLDLEETKRFMHHYNFPPFSVGEARPLRPPGRREIGHGALGERALSYVIPSEAEF
PYTIRLVSEVLESNGSSSQASICASTLAMMDAGVPITAPVAGIAMGLIKEGEHFSILTDI
QGMEDHLGDMDFKVAGTSKGVTALQMDIKIDGINRDILKQALDQAKAGRTFIMNKMLERI
SEPKKELSAYAPKIVVMQINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGKVFIASSN
AEMNERAKQIIEGIVRDVVVGETYLGTVKRVEKFGAFVEVLPGKEGLVHISQLSTERVAK
VEDVVKVGDTITVKVTEIDNQGRVNLSRKATLVNNEVSTQS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgtgtgcaaatggatttggccggacgtccgctcattcttgaaaccggtcgt
ttagccaagcaagccaacggcgcggtacttgcccgctatggcgatacagttgtgctctgt
accgtgaccgcttccagcgagccgaaagatcttgatttcttcccgctgacggtcaactat
gaagagcgcttatatgcggcaggtaaaattccgggcggatttatcaaaagagaaggacgt
ccgagcgagaaagcgattctctccagccgtctgactgaccgtccgatccgccctctgttc
ccggaagggttccgtaacgacgtacagatcgtcgcggtggttatgagcgtggatcaggag
tgtccgccggaaattaccgctatgatcggtgtttccgctgcattgtcgatctccgacgta
ccgttcagcggtccggtcggcggcgtcatcgtaggccgcatcgacggtaacttcgtcgtg
aacccgacgccggcgcaggaagacaagagcgacgttcatctcgttgtagcaggtaccaag
gatgccatcatgatggtagaagcaggcgctgccgaagttccggaagacgttatgctagaa
gcgatcatgttcggacatgacgagatcaagaaagtgatcgcccttcaggaacagctcgtt
gccgaagccggtgttcctaaaatggaagtgaagcttcattcggtagacggcgaaatcagc
acagccgtgcgcgagtttgccgaagcccgtctcgttgaagcgattaaggttcaagagaag
catgcgcgccaagaagcgatcgacgcagtcaacgcggatgccgttgcgcattttacggcg
ctctatgaagaaacgccggagaagctgaaagacgtcaaagaagtgcttcacgatatcgtg
aaagacgaagtccgccgccttatcacgcatgacaaggtaagaccggatggacgcgcactc
gatgaaatccgtccgatcgacgtggacattaatctgctgccgcgcacgcacggctccgga
ctgtttacacgcggacaaacgcaagcactaagcgtatgtacgctcggagcgctcggcgac
gtacagatcctcgacggtttggatctcgaggaaaccaaacgctttatgcaccattacaac
ttcccgccgttcagcgtaggggaagcaagaccgcttcgtccgccgggacgccgcgaaatc
ggacatggcgctctcggagaacgcgcgctttcgtacgtgattccgagcgaagccgaattc
ccgtatacaatccgtctcgtttcggaagttctggaatccaacggttcgagctctcaagca
agtatttgcgcgtccacgctggctatgatggatgcgggcgttccgattacggctccggtt
gccggtatcgcgatgggacttattaaagaaggcgagcatttctctattttgacggatatt
caagggatggaagatcatctcggagatatggactttaaagtggcaggtacgtccaaaggg
gttaccgctcttcaaatggacatcaagattgacggaatcaatcgcgatattctgaagcag
gccttggatcaggctaaagcaggccgtacgtttatcatgaacaaaatgctggagcgcatc
tcggaacctaagaaagaactttccgcttacgcgcctaagattgtcgtgatgcagatcaac
ccggataagatccgtgacgtgatcggagcaggcggcaaaatcatcaataaaattatcgaa
gaaaccggcgttaagattgacatcgagcaggacggcaaagtctttatcgcttcgtccaac
gcggagatgaacgaacgtgccaagcagattatcgaaggtatcgtacgcgacgtcgttgtc
ggcgaaacttacctcggtacggtaaagcgcgtggagaagttcggagctttcgtagaagtg
ctgccgggcaaagaaggactcgtccacatttcccagctgtctaccgaacgggttgccaaa
gtggaggatgtcgttaaagtcggcgatacgattaccgttaaagtcacggaaatcgacaat
caagggcgcgttaacctgtcccgcaaagcaacgctcgtgaacaacgaagtttccactcaa
tcctaa
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