Penaeus chinensis (fleshy prawn): 125034865
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Entry
125034865 CDS
T08118
Name
(RefSeq) maternal effect protein staufen-like isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pchn01009
]
125034865
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchn03019
]
125034865
Protein phosphatases and associated proteins [BR:
pchn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125034865
Messenger RNA biogenesis [BR:
pchn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125034865
mRNA cycle factors
Stress granule specific factors
125034865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
125034865
NCBI-ProteinID:
XP_047482857
LinkDB
All DBs
Position
18:31068440..31089537
Genome browser
AA seq
1066 aa
AA seq
DB search
MAQVPLRMAQPGLVPPHQQRPPMMVSMTQPPPVSMQAGLVSMAPMMAPAGGMAVMTQAMS
HPDSGVGPDHHTLNAPYHHHHHPHHHHGPPGPHHPGPPPHHPSGPPQPPPTGPPPHTGPP
HSQYHPAHHPAQAPHHGPHPTHAPHHGPHHSGPHSGTLSGPHSGPHSGPHGGPHGGPHSG
PHGGPHGGPHSHGGPHMGPHTSNSGSGPHSGPHGGPHGGHHGGPTHPQSHLQAAAVAGPP
HMTHPPHTVMHHSAPHQMSGMGSGGPGGMGASPNSSHQQQQQQQQQQQQQQQQQQQQQQP
PPPLHTQVQHQPMAQTMQHQPHQQQPQQQQQQQPPQQHQQQPQPQDIVGNGGVVVGMTPT
SSGVGVSVGGSSPTNSSSMSNSMCLSNTDPSTSSKEKTPMCLINELARYNKIQHQYCLTD
EKGPAHKKTFTVTLRLGESEEYTASGPSIKKAQHSAAAIALEKTQFKHPPPKTQRQNKQT
KLTPTVELNALAMKRGEAAVYTFMETPRPPNPYFNMPPNIRAMYNQKYYGRPPLYPIFFV
TLRVGTREFIGEGTTAQQAKHNAASKALKLMKQLPMPENATTCTQGDLSDLDPNADLKSP
ISLVHEIALKRNLTVAFEVIRESGPPHMRTFVTVCIVGEYRTEGEGTGKKVSKKRAAELM
LEELRKLPALPPTSLIRVKRKPTTKKKSRNLIKVGQEEQKAAPEYGQGINPISRLIQIQQ
AKKEKEPVYTMLAERGVPRRREFIMQVTVGNQSAQGSGPNKKLAKRAAAENMLQLLGYSR
PQPQPGKPAIKTDGAHSDPDKTRKVTFLEDGGETRGSDSAVVGGVNNVNHMGGPAVGGGR
QLVPGLIMMPDGSALHGFQQVQTQAMSMVSVGAMVSMQATATIAKELLKSGNSPTAEAMV
KQNPPTGPQGPPQGPPPSSQQQAPMQPPPQQQQQQPMATSQQQQQPQPPPQQQVPQPQAP
PQQQQQQQQQQSMVNQNQTVPSTQAVRPKDQLMYLAQILGLQVQFTDFPKGNKSEYLSLV
SLSTSPPHVSHGAGPTIDDSHDQACLTALRALAKMGLDTVTAAKQE
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtaccattgcgcatggctcagcctggtctggtgcccccccatcaacaacgt
cctcccatgatggtctccatgacacaaccaccacctgtctccatgcaagcaggtctggtg
agcatggcgcccatgatggccccagcgggtgggatggcggttatgacgcaggccatgagc
cacccagattctggtgttggtcctgatcatcacaccctcaatgctccatatcatcatcat
catcacccccatcaccatcatggccctcctggtccacatcacccaggccccccaccacac
catcccagtgggcccccccagcctcccccaacaggtcctcccccccacacgggccctccc
cactctcagtatcaccctgcccatcacccagctcaggcccctcatcatggcccacatcca
actcatgccccacaccacggtccacatcactctggcccacactcggggaccctttctggc
ccacattcgggtcctcactcggggccacatggtgggccacatggtggaccacattctggt
ccacatgggggtccacatggaggaccacatagtcatggtggccctcacatgggacctcac
acaagcaacagtggtagtgggccacacagtggtcctcatggtgggccacatggaggacat
catggtggaccaacacatcctcaatcccacctacaagcagcagcagttgcgggtcctccc
cacatgacacaccctccacatactgtcatgcaccactctgcgccacaccagatgagtggc
atgggtagtggagggcctgggggcatgggagcctctccaaacagtagtcatcaacagcaa
caacagcagcaacaacaacaacagcaacaacagcagcagcaacaacagcaacagcaacct
ccaccaccactccatacacaagtacaacaccaaccaatggctcagacaatgcaacatcaa
ccacaccaacagcaaccacaacaacaacagcagcagcagccaccacagcagcaccagcaa
caaccacaaccacaagatattgttggcaatggtggtgtagtggtaggaatgactccaaca
agtagtggtgttggtgttagtgtgggtggctcatctccaacgaattcctcttcaatgagc
aactccatgtgcctctctaatactgatccttcaacgtcaagtaaagagaagaccccaatg
tgtcttataaatgagcttgccagatataataagattcaacaccagtactgtttaacggat
gagaagggtccagcacacaagaagacctttacagtaacattgaggcttggggagagtgag
gaatacacagcctctggtcccagcatcaaaaaagctcaacattcggctgctgccatagct
ctcgagaagacgcagttcaaacacccacccccaaagacacaacgacaaaacaaacaaacc
aaactcacaccgaccgtagaattaaatgcccttgcaatgaagcgaggagaagctgctgtt
tataccttcatggagaccccccgtccccccaatccatacttcaacatgccaccaaacata
agagcaatgtataatcagaaatattatggacgaccgccactttaccctatattctttgta
acgttaagagttggcactcgggaattcataggtgaaggaaccacagctcaacaggcaaag
cacaatgcagcctccaaagctttaaaattaatgaagcaacttcccatgcctgagaatgct
actacgtgtacacaaggagatttgtcagatttggacccaaatgcagatttgaaatctcct
atctcccttgttcatgaaattgcactgaagcgcaatttgactgttgcgtttgaagtaata
cgggaatcgggtcctccacacatgcgaacttttgtcacagtttgcattgtgggagaatat
agaacagaaggagaaggcactggcaagaaggtcagcaaaaaacgagcagcagaacttatg
ctagaagaactacgcaaattgcctgccttaccaccaacctcactcatacgagttaagcgt
aaacccaccacgaagaagaaaagtcgaaacctcatcaaggtgggtcaagaggaacaaaag
gcagctccagagtatgggcagggtatcaatccaatatcaagactgatccagatccagcag
gctaagaaagagaaagagccagtgtataccatgcttgctgaacgaggagtgcctcgacgc
agagaattcatcatgcaggtgacagttggcaaccaaagtgctcaaggtagtggtccaaat
aagaagctagccaaaagggctgctgcagagaacatgttacaactccttggttactcccgg
ccacagccccagcctggcaaacctgctatcaagactgacggtgctcactctgaccctgac
aaaactaggaaggtgacattccttgaagatggaggagagaccagaggatcagattccgct
gttgttggtggtgtgaacaatgtcaaccacatgggaggccctgcagttggtggaggacgt
cagctagtcccaggactcatcatgatgccagatggttcagctcttcatggattccagcag
gttcagacacaagctatgagtatggtcagtgttggtgccatggtaagtatgcaagcaaca
gcaacaatagcaaaggaacttttgaaatcaggaaactctccaacagcagaagcaatggta
aagcagaacccaccaactggcccacagggaccaccacagggaccccctccctcaagccaa
cagcaggcacctatgcagccaccaccacagcagcaacagcaacagccaatggcaacttct
cagcagcagcaacaaccacagcctcctccacaacagcaggtccctcaaccacaggcacca
ccacagcagcagcaacaacagcagcaacagcagtccatggttaatcagaatcagactgtg
ccgtcaacccaagctgttcggccaaaggatcagctgatgtatttggcgcagattttaggc
ttgcaagtgcagtttactgattttccaaagggcaacaagagtgaatatctgagtctggtc
tcacttagcaccagcccccctcatgtatctcatggtgcaggccctactattgatgattca
catgatcaggcttgcttgacagctctgcgagcactagcgaagatgggcctggacacagtc
acagcagccaagcaagaataa
DBGET
integrated database retrieval system
