Pseudomonas chlororaphis subsp. piscium: C4K32_0037
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Entry
C4K32_0037 CDS
T09060
Name
(GenBank) Glycine cleavage system transcriptional activator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchp03000
]
C4K32_0037
Transcription factors [BR:
pchp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
C4K32_0037
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_20
HTH_5
HTH_30
HTH_IclR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AZC66737
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Position
38972..39865
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AA seq
297 aa
AA seq
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MSHDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGVSLFVKEGRGL
KLTDAGVRLRDASSDAFERLRTVCAELSQSTADAPFVLGCSGSLLARWFIPRLGRLNADL
PDLRLHLSAGEGDLDPRRPGLDALLVFAEPPWPADMQVYELASERIGPVLSPRYSRYEQL
REAPASALLGEALLQTTSRPQAWPSWARQNGIDAGALKFGQGFEHLYYLLEAAVAGLGVA
IAPQPLVAEDLRAGRLVAPWGFCETPGQLALWLPKRAADGRARQLAQWLRNELRQTP
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgacctgcccccgctgaacgccctccgggccttcgaagccaccgcccgcctg
aacagcgtcagtcaggcggccgagcagctgcacgtcacccatggcgcggtcagccgccag
ttgaaggtgcttgaagagcatcttggggtgagcctgttcgtcaaggaggggcgcggcctg
aaactcacagatgccggggtgcgcctgcgcgatgccagcagcgatgccttcgagcgcctg
cgcacggtctgcgccgagctgagccagagcaccgccgatgcgcccttcgtgctcggttgt
tccggcagcctgctggcgcgctggttcattccgcgcctggggcggctgaatgccgacctg
ccggacctgcgcctacacctgtcggccggcgaaggcgatctcgacccgcgccggccgggg
ctggatgccttgctggtattcgccgagccgccgtggccggcggacatgcaggtctatgaa
ctggccagcgaacgcatcggcccggtgctcagcccgcgctacagccgctacgagcaactg
cgcgaggcgccggccagtgcgctgctcggcgaggcattgctacagaccacctcgcgcccg
caggcctggcccagctgggcgcggcagaacggcatcgacgccggggcgctgaagtttggc
cagggtttcgagcatttgtattatttgctggaggctgcggtggccgggctgggcgtggcg
atcgcgccgcaaccgctggtggccgaggacctgcgcgccgggcgcctggttgccccctgg
ggtttctgtgaaaccccagggcaactggcgttgtggctacccaagcgcgccgcggacggg
cgcgcccggcaattggcgcagtggcttcgcaacgagctgcgccagacgccttaa
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