Pseudomonas chlororaphis subsp. piscium: C4K32_1534
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Entry
C4K32_1534 CDS
T09060
Name
(GenBank) T1SS secreted agglutinin RTX
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Big_12
Cadherin_3
Cadherin
HemolysinCabind
TPPII_Ig-like-1
Motif
Other DBs
NCBI-ProteinID:
AZC68211
LinkDB
All DBs
Position
complement(1636037..1642060)
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AA seq
2007 aa
AA seq
DB search
MAAQDNATALGNFALASVTEAADTANGTVNWTYTLDNAAAQSLAQGQTASETYVVTISDG
HGSPTTQNVTITITGTNDQVQITSGVQTGDAKEDSGDYAASGNITFTDADLIDTHSVTVT
PGASGYLGSFTTDPLNDSTGTGSGSLGWHFAVDNAALQFLGEGQTLTQTYDVAIGDGAVQ
TVTLTITGSNDRPTLTIADTTGAMSEGNATATLSDSGALSFADLDNIDVVTVSHTANGNI
AWSGGTLNAGVASALVAGFSVDQNSWDYSSSQNLDFLGAGETITFSYTVVATDDSGAANA
ASATQTVTITITGSNDAPVLSFATGNDLGAVQEDTTLSISGQFSSTDIDHDATATWSIVG
SNTDSYGSIDVDSTGQWTYTLANGTDGIAGAVQSLKAGESHDEVFSVQVSDGLGGVDTQL
VTVAVTGSNDAPVLSFVSGNDVGSVQEDTVLSVSGQFSSADIDHDASASWSIAGTDTGTY
GSIAVDSSGQWTYTLANGTDGVASAVQSLKEGESHDEVFSVQVSDGLGGMDTQLVTVTVT
GSNDAPVLSFATGNDLGAVQEDSTLSVSGQFSSADIDHDATATWSIAGSNTGSYGSIAVD
SSGQWTYTLANGTDGVASAVQSLKEGESHDEVFSVQVSDGLGGVDNQQVTVTVTGSNDAP
VLSFATGNDAGAVQEDSILSVSGQFSSSDIDHDATASWSIAGSNTGSYGSIAVDSSGQWT
YTLANGSDGVAGAVQSLKAGESHDEVFSVQVSDGLGGVDTQLVTITVTGSNDAAVLSSAN
VTLSETNAPLTTGGSLTVSDIDSPESFQAQTDTVGSYGKFSIGTGGAWTYVADSAHNEFV
AGTTYTDTFAVSSADGTLTSVTLHILGTNDAAVLSADIANLIETNAAADISTAGTLTISD
VDSAATFVAQTNTAGNYGKFSIGTSGAWTYVADSAHNESVAGTTYTDTFTVSSADGTLTS
VTVHILGTNDAAVLSADIANLIETNAAADISTAGTLTISDVDSAATFVAQTDTAGSYGKF
SIGTDGAWTYVADSAHNEFVAGTTYTDTFAVSSADGTLTSVTVHIAGSNDLPTITSNGGD
TTASINVAENTAAVTTVAATDVDLPTQTLSYSIVGGADAAKFSIVSGTGALSFISAPNFE
APTDSGTNNVYDVIVRASDGTLFDDQAIAVTVTGVNDNSPVITSNGGGTTASVNVAENTT
AVTTVMASDADLPAQTLSYSILNTAGTDFGKFSISASGVLTFNSAPDYENAQDVGGTDGD
NAYVVDVRVADGNGGTDTQTITVNVQNVVETPVDSVPPTVAVTGTALGNSVGSTSTVTFQ
FSETVSGFNLSDVSVTTTSGTPRATFSNFTQVDGDTYTATLTRTLGGSVKVDVAANSYTD
LAGNPGSAGSSANLPAGVAGEPINLALNVPLAEINGSVTVAISGVPSGWVFNAGTDNGDG
TWTVQTNDPGALTVTTPSDFAGALVLDINMYWSNSDGSAASAYVFNNVEVYAPGSPIFAL
SADDNLTGSSGADTFVFAQPIGNNQIYNFNVAADKIDLIGFTGVTTFADLSISNDANGNA
LISIGSGQTVTLRGVDATDLGEANFQFDVDPLTHNSGTLTIADGAIMPFGGGIHNSGTIE
LGSAGNETSLEILFRGATLTGGGQVLLSDNAQNVIFGGSVDTVLTNVDNRISGAGQLGAG
QMILANAGLILASGLNSLVLDTGTHSITNSGVLESTATGGMTVASAVENTGHLWANGGDL
HLLADVTGNGSATIDGDASLTFAGAAHTSVAFHGEGAGSLVIAQAEAAGSLVGILGLESD
DLLTFGDLAFGANTQLNYTANASGAGGLLTVDDGAHRAEVNLLGHYSVEDFQVSDGGEAG
TQVSYHGQSSDTLVGSMLADTLSGGDGNDIIVGRGGEDTLSGGAGADVFAYLNANEGGDH
ILDYNYAEGDTLDLSTLLNANFVSGTSQVADFVQLAQSGSGITVQVDPDGANNGKHFVDV
AVLDHASTPSPDLVRTWFGEADHTLTV
NT seq
6024 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcgcaagacaatgccacagcgctgggcaacttcgccctcgcctctgtgactgaa
gctgccgatacagccaacggcaccgtcaactggacttataccctggataacgcggcagcc
cagtccctggcccagggtcagacggcgagcgaaacttatgtggtcaccatcagtgacggg
catggctcgccgaccacgcagaatgtgaccatcaccatcacgggcaccaacgaccaggtg
cagatcaccagtggcgtgcagaccggagatgccaaggaagacagcggcgactacgctgcc
agtggcaacatcacctttaccgacgccgacctgatcgacacccacagcgtcaccgtcacg
ccgggcgcttccggctacctgggcagcttcactacagacccactgaacgacagcaccggc
acgggcagcggctcgctgggctggcacttcgcggtagacaacgccgccctgcagttcctg
ggcgaaggccagaccctcacccagacctatgacgtggcgatcggcgacggcgcggtgcag
accgtgacccttactatcaccggcagcaacgaccggccgacgctgactattgccgacacc
accggcgccatgagcgaaggcaacgctacggccacactgagcgacagcggcgccctgagc
tttgccgacctggacaacatcgacgtggtgactgtgtcgcacaccgccaacggcaacatc
gcctggagcggtggcacgctcaatgcgggcgtggcttcggcactggtcgccggcttctcg
gtcgatcagaacagctgggactacagcagcagccagaacctcgacttcctcggcgctggc
gaaaccatcaccttctcgtacacggtggtcgccaccgatgacagcggcgcggctaacgcg
gcttcggcgacgcagactgtcaccatcactattaccggcagcaacgacgcgccagtactc
agcttcgctaccggcaatgatctcggtgccgtacaggaagacaccaccctcagcatcagc
ggccaattcagctcgaccgacatcgatcacgacgctacggctacctggagcatcgtcggg
tccaataccgacagctatggctcaattgacgtggatagcactggccagtggacttacacc
ctggccaacggcaccgatggcattgctggtgcggtgcagtcactgaaggcaggcgaaagt
catgatgaagtgttcagcgttcaggtcagtgacggcctcggtggtgtggacactcaactg
gtgaccgtcgccgtcaccgggagcaacgacgcaccggtgctcagcttcgtgtcgggaaat
gatgtgggctcggtgcaagaagacacggtcctcagcgtcagcggccaattcagctcggcc
gacatcgatcacgatgcctcagccagctggagtatcgccggtaccgataccggcacctat
ggctcgatcgccgtcgacagcagcggccagtggacctacaccctggccaacggcaccgat
ggtgtcgctagtgcggtgcagtcgctgaaggagggtgagagccacgacgaagtattcagc
gtacaggtcagcgatggtctgggcggtatggatacccagctggtgaccgtcaccgtcacc
ggtagtaacgacgcaccggtgctcagctttgcgaccggcaatgatctcggcgccgtgcaa
gaggactccaccctcagcgtcagtggccagttcagctcggccgatatcgatcacgacgct
acagctacctggagcatcgccgggtccaataccggcagctatggctcaattgccgtcgac
agcagcggccagtggacctacaccctggccaacggcaccgatggtgtcgctagtgcggtg
cagtcgctgaaggagggtgagagccacgacgaagtgttcagcgtccaggtcagtgatggc
ctcggtggcgtggataaccagcaggtaaccgtcaccgtcaccggcagcaacgatgcaccg
gtactcagctttgcaaccggtaatgatgccggtgccgtgcaagaggattccatcctcagc
gtcagcggccagttcagctcgagcgatatcgaccacgatgctacagctagctggagcatc
gccggttccaataccggcagctatggctcaattgccgtcgacagcagcggccagtggacc
tacaccctggccaacggcagcgatggcgttgctggtgcggtgcagtcactgaaggctggc
gaaagtcacgacgaagtgttcagcgtgcaggtcagcgatggcctcggcggtgtggatacc
cagttggtaaccatcaccgttaccggcagcaacgacgccgccgtgctctcctcggccaac
gtcacgctgagcgaaaccaatgctccgctgaccaccggtggcagcctgaccgtcagcgat
atcgacagcccggaaagcttccaagcgcaaaccgacaccgtcggcagctacggcaagttc
tccatcggcaccggtggggcctggacctacgtcgccgactccgctcacaacgagttcgtc
gccggcaccacctacaccgacaccttcgcggtaagcagtgccgacggcacccttacctcg
gtcaccctgcatatcctcggcaccaatgatgcggccgtgctgtccgccgacatcgccaac
ctgatcgagaccaatgccgccgccgatatctccaccgccggcaccctgaccatcagcgac
gtcgacagcgccgcaaccttcgtcgcgcaaaccaacactgctggcaactacggcaagttc
tccatcggcaccagcggtgcctggacctacgtcgccgactccgcacacaacgagtccgtc
gccggcaccacctacaccgacaccttcaccgtgagcagcgccgacggcaccctcacttcg
gtcaccgtgcatatcctcggcaccaatgatgccgccgtgctgtccgccgacatcgccaac
ctgatcgagaccaatgccgccgccgatatctccaccgccggcaccctgaccatcagcgac
gtcgacagcgccgcgaccttcgtcgcgcaaaccgacaccgccggcagctacggcaagttc
tccatcggcaccgacggtgcctggacctatgtcgccgactccgctcacaacgagttcgtc
gccggcaccacctacaccgacaccttcgccgtgagcagtgccgatggcaccctcacttcg
gtcaccgtgcatatcgccggcagcaatgacttgccgactattacctccaacggcggtgat
acgacggcttcgatcaacgtggcggagaacacagcagctgtcacgacagtggcggcgacc
gatgttgatctgccgacgcaaacactgagctacagcatcgtcggcggagcggatgccgcg
aagttctcgatcgtttcaggcacaggcgcgctgagctttatctctgcacccaactttgaa
gcgccgacagattcgggaacgaacaacgtctatgacgtgattgtgcgggcgtcggacggc
acgctgtttgacgaccaggcgatcgcggtaaccgtgacaggcgtcaacgacaacagcccg
gtgatcacctccaacggcggtggcacgacggcttcggtcaacgtggcggagaacaccacc
gcagtcacgacagtgatggcgagcgatgccgatctaccagcgcagacgctgagctactcg
atcctgaatacggccgggacagacttcggcaaattctcgatcagtgcgagcggagtgctg
accttcaattcggcgcccgattacgagaatgcccaggatgtcggtggtaccgacggcgac
aatgcctacgttgtggacgttcgggtggccgacggcaatggcggaaccgacacgcagacc
attacggtaaacgtgcagaacgtcgtcgagacgccagtcgatagcgtgccgccgacggtg
gcagtgacggggacggccttaggcaattcggttggttcaacgtcgacggtcacgttccag
ttcagtgagacagtgagcggtttcaacctttcggatgtctcggtgactacgacgagcgga
acgccccgcgcaaccttcagcaactttacccaggtcgatggcgacacctacacagcgacg
ctgaccagaacactgggcggtagcgtgaaagtcgacgttgccgcgaacagctacaccgac
ctggcgggtaatcccgggtcggccgggagcagtgcaaaccttccagcaggcgttgccggc
gaacccatcaatctggccctcaacgttccactggccgagatcaacggctccgtaacggtg
gccatcagcggcgttccttcggggtgggtgttcaatgctggaaccgacaatggcgacggc
acctggaccgtgcagaccaacgatcccggcgccttgaccgtgaccaccccaagcgacttc
gcaggtgcgttggtgcttgatatcaacatgtactggagcaacagtgacggcagcgccgca
agcgcctacgtgttcaacaacgtcgaagtctatgccccaggctcgccgatcttcgccttg
tccgctgacgacaacctgaccgggtcgtccggtgccgacacgttcgtcttcgcccagccg
atcggtaacaaccagatctacaacttcaatgtcgcggcggacaagatcgacttgatcggc
ttcacaggcgtcaccaccttcgctgacttgagcatcagcaacgatgcaaacggcaatgcc
ctgatcagcatcggttccggccagacggtcaccctgagaggtgtcgatgcaacagaccta
ggcgaagcgaacttccagttcgatgtggacccgctcacccacaacagcggcaccctcact
attgccgacggcgcgatcatgccgttcggtggcggcatccataacagcggcaccatcgag
ctcggctccgccggcaacgagaccagcctggagattctgttccgtggcgcgaccttgacc
ggtggcggccaggtgctgctatcggacaacgcgcaaaacgtgattttcggcggcagcgtc
gacaccgtgctgaccaatgtcgacaaccgcatttccggcgccggccagttgggcgccggg
caaatgatcctggccaatgcggggctgatcctggccagtggtttgaacagtctggtgctc
gacaccggtacccacagcatcaccaacagcggtgtgctggagtccacagccacaggcggc
atgacggtggccagcgcggtcgaaaacactggccatctgtgggccaatggtggcgacctg
cacctgctggccgacgtgaccggcaatggcagcgcgaccatcgacggcgatgccagcctg
acctttgccggtgccgcacacacctccgtcgccttccacggcgaaggtgcgggctcgttg
gtgatcgcccaggctgaagcagcgggctcgctggtcggcattctcggccttgagagcgat
gacctgctgacgttcggcgatcttgccttcggtgccaacactcagctcaattacaccgcc
aatgcctctggcgccggcggcctgctgacggtggacgacggcgcacatcgagccgaggtg
aacctgctggggcactactcggtggaagacttccaggtcagcgacggcggcgaagccggt
acccaagtcagttaccacggccaatccagcgacacactggtgggtagcatgctcgccgac
accctcagtggcggcgacggcaacgacatcatcgtcggtcgtggcggcgaggacaccctc
agcggcggcgcgggagccgacgtgttcgcctacctcaacgcgaatgaaggcggtgaccat
atcctcgactacaactacgccgaaggtgacaccctcgacctctccacgctgctcaacgcc
aacttcgtcagcggcaccagccaggtggccgactttgtccaactggcgcagtccggcagc
ggcattactgtgcaggtggatcccgatggcgccaacaatggcaagcacttcgtcgatgtg
gcggtgctagaccacgctagtacgcccagccccgatctggtgcgcacctggttcggggag
gccgaccacacactgacggtgtga
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