Pseudomonas chlororaphis subsp. piscium: C4K32_1553
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Entry
C4K32_1553 CDS
T09060
Name
(GenBank) Cyn operon transcriptional activator
KO
K11921
LysR family transcriptional regulator, cyn operon transcriptional activator
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchp03000
]
C4K32_1553
Transcription factors [BR:
pchp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
C4K32_1553
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
HTH_20
MarR_2
MarR
HTH_24
Mga
Motif
Other DBs
NCBI-ProteinID:
AZC68230
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Position
1662582..1663472
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AA seq
296 aa
AA seq
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MLLRHIRYLLAVAEHCNFTRAAEALHVSQPTLSQQIKQLEDSLGAPLFDRSGRTVRLTDA
GEAYVRYARLALQDLEAAKRAMHDVQDLRRGSLRLGMTPTFITYLAGPLLTRFNQRYPGV
ALSLEEMTQDRLEAALAEDRLDLGIAFAGQHLPDIDSQLLFEESLSLMVSREQQPELPRQ
MTAAELERQPLVLLSGDFATRQHIDRYCREQGITPRIAIEANSIGAIVEIVRRGQLATIL
PLAITQEQPGLRPVILQPALAPRSVALLGRKGAYRSAACQAFRELLTTQGVGAASH
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgctgctacgccatatccgttacctgctggctgtcgccgagcactgcaacttcacccgc
gccgccgaagccttgcatgtgtcccagccgacgctgtcgcaacagatcaagcaactggag
gacagcctcggcgcgccgctgttcgaccgctcggggcgcaccgtgcgcctgaccgacgcc
ggcgaggcctatgtgcgttatgcgcggctggccctgcaggacctggaggcggccaaacgg
gccatgcatgacgtgcaggatctgcgacgtggctcattgcgcctgggcatgaccccgacc
ttcatcacgtacctggcggggccgctgctgacccgtttcaaccagcgttatccgggggtt
gccctgagcctcgaagaaatgacccaggaccggctggaagcggccctggccgaagaccgc
ctggacctgggcatcgcctttgccgggcagcacctgccggacatcgacagccagttgctg
ttcgaggagagcctgagcctgatggtcagccgcgagcagcagcccgagctaccgcggcag
atgacggcggccgagctggaacggcagccgctggtgttgctcagcggcgatttcgccacc
cgccagcatatcgatcgttattgccgcgagcagggcataacgccgcgcatcgccatcgaa
gccaactctatcggcgccattgtcgagatcgtccgccgtgggcaattggcgaccatcctg
ccgctggccattacccaggagcagccgggcctgcgcccggtgatcctgcaaccggccctg
gcgccccgtagcgtggcgctgttggggcgcaagggcgcctatcgcagcgccgcgtgccag
gcttttcgcgagctgctgacgactcagggcgtgggcgccgccagccactga
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