Pseudomonas chlororaphis subsp. piscium: C4K32_6173
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Entry
C4K32_6173 CDS
T09060
Name
(GenBank) Uncharacterized protein ImpH/VasB
KO
K11895
type VI secretion system protein ImpH
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
C4K32_6173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pchp02044
]
C4K32_6173
Secretion system [BR:
pchp02044
]
Type VI secretion system
Imp/Vas secretion system core components
C4K32_6173
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Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
HalOD2
Motif
Other DBs
NCBI-ProteinID:
AZC72790
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All DBs
Position
complement(6743636..6744643)
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AA seq
335 aa
AA seq
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MDTTYGSTAPALSGLTRVIREYSLFQAVLLVVDRLRDSHPGLSEEDLYDQLEFQANPSLG
FPGSDVDRVEFFEEHGQMRARLRFNLIGLFGSGSPLPAFYGEQALGDSEDGNPTRNFLDL
FHHRLQRLMLPIWRKYRYRASFKSGALDPFSAQLFALIGLGGEDIRKAKELNWKRLLPYL
GLLSLRAHSAALIEAVLRYYFKHADLVIEQCIERRVEILEEQRNRLGRANSQLGEDLVLG
ERVRDRSGKFRIHIRQLDWQRFHEFLPIGFGYQPLCALVRFTLRDPLDYDIRLVLRQEEI
RELRIGEQNACRLGWTSWLGRERADGVVTLGSKIH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggacaccacgtatgggtctacagcccctgctttaagcgggctgacccgggtcatccgc
gagtactcgctgttccaggccgtgctgctggtggtggaccggctgcgcgactcccatccg
ggcctgagcgaagaggatctctacgaccagctggaattccaggccaatccgagcctgggt
ttccctggcagcgacgtcgatcgcgtggagtttttcgaagagcacgggcagatgcgcgcg
cgcctgcggttcaacctgatcgggctgttcggctccggctcgccgctgccggcgttttac
ggtgagcaggccctgggtgacagcgaggacggtaacccgacccgcaacttcctcgacctg
ttccaccatcgcctgcagcggctgatgctgccgatctggcgcaagtaccgctaccgcgcc
agcttcaagagcggcgcgctcgacccgttttccgcccagctgttcgccctgatcggcctc
ggcggcgaagacatccgcaaggccaaggagctgaactggaagcgcctgctgccttacctc
ggcctgctcagcctgcgggctcactcggcggcgctgatcgaggccgtgctgcgttactac
ttcaagcacgcggatctggtgatcgagcagtgcatcgagcgccgggtggagattctcgag
gagcaacgcaaccgcctgggccgcgccaacagccagctcggcgaagacctggtgctgggc
gaaagggtgcgcgaccgcagcggcaagttccgcatccatatccgccagctcgactggcag
cgcttccacgaattcctgccgatcggtttcggctaccagccgctgtgcgcgctggtgcgg
ttcaccctgcgtgacccgctggactacgacattcgcctggtcctgcgccaggaagaaatc
cgcgaactgcgcatcggtgagcagaacgcctgtcgcctcgggtggaccagttggctcggc
cgcgagcgcgcggacggcgtggtgaccctgggcagcaaaattcattaa
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